Pseudomonas alloputida: LU682_007050
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Entry
LU682_007050 CDS
T09345
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pald
Pseudomonas alloputida
Brite
KEGG Orthology (KO) [BR:
pald00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pald03016
]
LU682_007050 (rnd)
Enzymes [BR:
pald01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LU682_007050 (rnd)
Transfer RNA biogenesis [BR:
pald03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LU682_007050 (rnd)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
WJR18572
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All DBs
Position
1534662..1535795
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AA seq
377 aa
AA seq
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MAIEIHWIRDDQSLAEHCRDWHQLPFVAVDTEFMRVDTFYPKAGLIQIGDGQRAFLIDPL
LIGNWQPLADLLEDSAVVKVLHACSEDLEVLLRLTGKLPQPLFDTQLAAGYLNLGFSMGY
SRLVQEVLGIELPKGETRSDWLQRPLSETQVSYAAEDAVHLAELFTVLRPRLSDDKYAWV
LEDGAELVAALRREVEPESLYRDVKLAWKLAPQQLAVLRELCAWREREARNRDVPRNRIL
KEHSLWPMAKSQPNNLSALAKIDEMHPRTIRQDGEFLIQLIKRAASLPAEQWPAPLPEPL
PIEAAGLLKQLRAIGQAEGERLGIAPELMLRKKALEALLKSGYPNGPYQLPDSLRGWRRE
RMGQALLDNLAGAGETR
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
gtggccatcgaaattcactggatccgtgacgaccagagcctggccgaacactgccgcgac
tggcaccaactgcccttcgtcgccgtcgacaccgaattcatgcgggtagacaccttttac
ccgaaagccgggctgatccagatcggcgacggccaacgcgccttcctgatcgacccgctg
ctgatcggcaactggcaacccttggccgacctgctggaagacagcgctgtggtcaaggtg
ctgcacgcctgcagcgaagacctcgaagtgctgctgcgcctgaccggcaagctgcctcag
ccgctgttcgacactcagctggccgccggttacctgaacctgggcttctcgatgggctat
tcgcgcctggtgcaggaagtgctgggcatcgaattgcccaaaggcgaaacccgttccgac
tggctgcaacgcccgctctcggaaacccaggtcagctacgctgccgaagatgccgtgcac
ctggccgagcttttcaccgtgctgcgcccgcggctgagtgacgacaagtatgcctgggtg
ctggaagacggcgccgagctggtggctgcgttgcgccgtgaagtcgagcccgaaagcctg
taccgcgacgtcaagctggcctggaagctggcgcctcaacaactggcagtgctacgtgag
ctgtgcgcctggcgcgaacgcgaagcgcgcaaccgcgatgtgccgcgtaatcgtatcctc
aaggagcactcgctgtggcccatggccaaaagccagccgaacaacctgtcggccttggcc
aagatcgacgagatgcacccgcgcaccattcgtcaggacggtgagttcctcatccagctg
atcaagcgcgccgccagcctgccggccgagcaatggcctgcgcccttgcctgagccgctt
ccgatcgaggctgctggccttctcaagcagctgcgtgccatcggccaggccgaaggcgag
cgcctggggattgcacccgagctgatgctgcgcaagaaagccctggaggcgctgctcaag
agcggataccccaatggcccttatcaactgcccgattcgctgcgcggctggcgccgtgag
cgcatgggccaggccctgctggacaacctggcaggtgccggagaaacccgatga
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