Pseudomonas alloputida: LU682_007455
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Entry
LU682_007455 CDS
T09345
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pald
Pseudomonas alloputida
Pathway
pald03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pald00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LU682_007455 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pald03019
]
LU682_007455 (recQ)
03400 DNA repair and recombination proteins [BR:
pald03400
]
LU682_007455 (recQ)
Enzymes [BR:
pald01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LU682_007455 (recQ)
Messenger RNA biogenesis [BR:
pald03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LU682_007455 (recQ)
DNA repair and recombination proteins [BR:
pald03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LU682_007455 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Sigma70_r4_2
HTH_40
HTH_23
ResIII
GerE
HTH_29
Glyco_hydro_57
Motif
Other DBs
NCBI-ProteinID:
WJR18650
LinkDB
All DBs
Position
1614441..1616588
Genome browser
AA seq
715 aa
AA seq
DB search
MLEQAQRVLKDIFGYDSFRGRQAAIIECVANGGDALVLMPTGGGKSLCFQVPGLLRPGLT
VVVSPLIALMDDQVATLDELGVSAAALNSTLTAEQQRELAGRLRRGEVKMLYLAPERLVQ
PRMLDFLRDLDISLFAIDEAHCVSQWGHDFRPEYLQLGQLAELFPHVPRIALTATADMRT
REEIVQRLHLQGAERFLSSFDRPNIFYRIVPKEAPRKQLMAFLGERRGNAGIVYCLSRKK
VDETAAFLCSQGFPALPYHAGLAAETRAANQHRFLNEEGLIMVATIAFGMGIDKPNVRFV
AHLDLPKSLEAYYQETGRAGRDGLPSDAWMAYGLQDMVMLKQMLQNSEGDERHKRIEQHK
LDAMLALCEETRCRRQSLLAYFDEILEQPCGHCDNCVDNIQTWDATEPARQALSAVFRTG
QRYGVGHLVDVLLGKDTEKVRNFGHEKLSVFGVGKGLAEVEWRSLFRQLVARGLVDIDLE
GYGGLRLSDSCRPLLRGEVTLQLRRDLKPQTTAKTSSSSGGSPASQLVRAEERDLWEALR
TLRRKLAEEHSVPPYVIFPDSTLLEMLRSQPVSLSDMAQVSGVGARKLERYGQAFLEVLN
NSGGTDEAPKVVLDLRHELVSLARAGMTPAQIAGQLNCSEKNVYSLLAEALGRQELSLDQ
AIDLPEDLMMEVQDAFLDGEGELPPVSAIAPQFGARVPEGVLYCVRAALAAEFEL
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaacaggctcagcgcgttctcaaggacatcttcggctacgacagtttccgtggg
cgccaggcagcgatcatcgaatgcgtggccaatggcggcgatgccttggtactgatgccc
accggtggcggcaaatcgctgtgtttccaggtgccggggctgctgcgcccgggcttgacg
gtggtggtatcgccactgatcgcgctgatggacgaccaggtcgccacccttgacgagctg
ggtgtgtctgcggccgccctgaactctaccctgacggcggagcagcagcgtgaactggcc
gggcgcctgcgccgtggtgaggtcaagatgctgtacctggcgccggaacgcctggtgcag
ccgcgcatgctcgacttcctgcgcgatctggacatctcgctgttcgccattgacgaggcc
cactgcgtttcgcaatgggggcacgatttccgcccagagtacctgcagctgggccagctg
gccgaactgtttccgcatgtgccgcgcattgcgcttaccgctacggccgacatgcgaacc
cgcgaggagatcgttcagcgcctgcacctgcaaggcgccgagcgcttcctgtcgagtttc
gaccggcccaacatcttttaccgcatcgtgcccaaggaggcaccgcgcaagcagttgatg
gccttcctcggcgaacgtcgtggcaacgctggcatcgtctactgcctgtcgcgcaagaag
gtcgacgaaaccgccgccttcctctgtagtcaggggttccccgcgctgccgtatcacgcc
ggcctggccgccgagacgcgggcggccaaccagcatcgcttcctgaacgaggaagggctg
atcatggtcgctaccattgctttcggcatgggtatcgacaagcccaacgtgcgcttcgtt
gctcacctcgacctgcccaaatcgcttgaagcctactatcaggaaaccggccgggccggc
cgtgacggcctgccctccgatgcctggatggcctacgggctgcaggacatggtgatgctc
aagcagatgctgcagaactccgaaggcgacgagcgccacaagcgcatcgagcagcacaag
ctggacgccatgctggcgctgtgcgaagaaacccgctgccgccgccagtcgctgctggcg
tacttcgacgagatcctcgaacaaccgtgcgggcactgcgacaactgtgtcgacaacatc
cagacctgggacgctaccgagccggcccgccaggcgctgtcggcggtgttccgcaccggc
cagcgctatggtgttggccacctggtcgatgtgctgttgggcaaggacaccgagaaggtg
cgcaatttcggccacgagaagctgtcggtattcggcgttggcaaaggcttggccgaggtc
gagtggcgctcactgttccgtcagttggtggcgcgcggcctggtcgatatcgacctggaa
ggctacggcggcctgcgcctgtccgacagctgccggccgctgctgcgcggcgaggtgacc
ttgcaactgcgccgtgatctcaaaccgcagaccacggccaaaacctcgtcgtccagcggc
ggcagcccggccagccagctggtgcgtgccgaagagcgcgatctgtgggaagcgctgcgt
accctgcgccgcaagctggccgaagaacacagtgtgccgccctacgtcatcttccccgac
tcgacactgctggagatgctgcgcagccagccggtcagcctcagcgacatggcccaggtc
agcggtgtgggggcgcgcaagctggagcgctacggccaggcgttcctcgaagtgctgaac
aacagcggtggcaccgacgaggctccgaaagtggtgctcgacctgcgccacgaactggtc
agcctggcccgtgccggcatgaccccggcgcagatcgccgggcagctcaactgcagcgag
aagaacgtgtatagcctgctggccgaggcgttgggccgccaggagctgagtctggaccag
gccatcgacctgccggaagacctgatgatggaggtgcaggacgcctttcttgatggcgag
ggtgagctgccaccggtgtcggccattgccccgcagttcggggcgcgggtgccggagggc
gtactctattgcgtgcgcgcagcactggcggcggaattcgaattgtaa
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