Pseudomonas alloputida: LU682_007805
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Entry
LU682_007805 CDS
T09345
Name
(GenBank) FAD-binding and (Fe-S)-binding domain-containing protein
KO
K26063
(R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
Organism
pald
Pseudomonas alloputida
Pathway
pald00310
Lysine degradation
pald01100
Metabolic pathways
pald01120
Microbial metabolism in diverse environments
Module
pald_M00960
Lysine degradation, bacteria, L-lysine => D-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
pald00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
LU682_007805
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
Fer4_8
BBE
CCG
Fer4_20
DUF3297
Motif
Other DBs
NCBI-ProteinID:
WJR18716
LinkDB
All DBs
Position
1684718..1687738
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AA seq
1006 aa
AA seq
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MIAQLSTVAPSANYPEFLEALRNSGFRGQISADYATRTVLATDNSIYQRLPQAAVFPLDA
DDVARVATLMGEPRFQQVKLTPRGGGTGTNGQSLTDGIVVDLSRHMNNILEINVEERWVR
VQAGTVKDQLNAALKPHGLFFAPELSTSNRATVGGMINTDASGQGSCTYGKTRDHVLELH
SVLLGGERLHSLPIDDAALEQACAAPGRVGEVYRMAREIQETQAELIETTFPKLNRCLTG
YDLAHLRDEQGRFNLNSVLCGAEGSLGYVVEAKLNVLPIPKYAVLVNVRYTSFMDALRDA
NALMAHKPLSIETVDSKVLMLAMKDIVWHSVAEYFPADPERPTLGINLVEFCGDEPAEVN
AKVQAFIQHLQSDTSVERLGHTLAEGAEAVTRVYTMRKRSVGLLGNVEGEVRPQPFVEDT
AVPPEQLADYIADFRALLDGYGLAYGMFGHVDAGVLHVRPALDMKDPVQAALVKPISDAV
AALTKRYGGLLWGEHGKGLRSEYVPEYFGELYPALQRLKGAFDPHNQLNPGKICTPLGSA
EGLTPVDGVTLRGDLDRTIDERVWQDFPSAVHCNGNGACYNYDPNDAMCPSWKATRERQH
SPKGRASLMREWLRLQGEANIDVLAAARNKVSWLKGLPARLRNNRARNQGQEDFSHEVYD
AMAGCLACKSCAGQCPIKVNVPDFRSRFLELYHGRYQRPLRDYLIGSLEFTIPYLAHAPG
LYNAVMGSKWVSQLLADKVGMVDSPLISRFNFQATLTRCRVGMATVPALRELTPAQRERS
IVLVQDAFTRYFETPLLSAFIDLAHRLGHRVFLAPYSANGKPLHVQGFLGAFAKAAIRNA
TQLKALADCGVPLVGLDPAMTLVYRQEYQKVPGLEGCPKVLLPQEWLMDVLPEQAPAAPG
SFRLMAHCTEKTNVPASTRQWEQVFARLGLKLVTEATGCCGMSGTYGHEARNQETSRTIF
EQSWATKLDKDGEPLATGYSCRSQVKRMTERKMRHPLEVVLQYAQR
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcccagctgtccaccgttgcaccgagcgccaattaccccgaattcctcgaagcc
ctgcgcaacagcggcttccgcggccagatcagtgccgactacgcaacccgcacggtactg
gccaccgacaactcgatctaccagcgcttgccgcaggcggcggtgttcccgctggatgcc
gacgatgtggcgcgggtcgccacgctgatgggcgagccgcgcttccagcaggtcaagctg
accccgcgcggtggtggcaccggcaccaacggccagtcgctgaccgacggtatcgtcgtc
gacctgtcgcggcacatgaacaacatcctcgaaatcaacgtggaagagcgctgggtgcgg
gtacaggccggcacggtcaaggaccagctcaatgctgcgctcaagccgcacgggctgttc
ttcgcccctgagctgtccacctccaaccgcgccacggtcggcggcatgatcaacacggat
gccagtggccagggcagctgcacctacggtaaaacccgcgaccacgtgctggagctgcac
agcgtgctgctcggtggcgaacgcctgcacagcctgccgatcgacgatgctgcgctggaa
caggcctgcgccgcgccgggccgggtcggcgaggtgtaccgcatggcccgggaaattcag
gaaacccaggccgaactgattgaaaccaccttccccaagctcaaccgttgcctgaccggc
tacgacctggcgcacctgcgcgacgagcagggccgcttcaacctcaacagcgtactgtgc
ggcgccgagggctcgctgggctacgtggtcgaagccaagctcaacgtgctgccgattccc
aagtatgcggtgctggtcaatgtgcgctacaccagcttcatggatgcgctgcgtgatgcc
aacgcgctgatggcgcacaagccgctgtcgatcgagacggtcgactccaaggtgctgatg
ctggcgatgaaagacatcgtctggcacagcgttgccgagtacttcccggcggaccccgag
cgccccacgctgggcatcaacctggtggagttctgcggcgacgagccggccgaggtcaac
gccaaggtgcaggcgttcatccagcacctgcaaagcgacaccagcgtcgagcgcctgggc
cacaccttggccgaaggcgccgaggcagtcacccgcgtctataccatgcgtaagcgttcg
gtcggcctgctgggcaacgtcgaaggcgaagtgcgcccgcagccgttcgtggaggacacc
gcagtaccaccagaacagttggccgactacatcgccgacttccgcgcactgctcgacggc
tacggcctggcctacggcatgtttggccacgtcgatgccggcgtgctgcacgtgcgcccg
gcactggacatgaaggacccggtgcaggccgcgctggtcaagccgatttccgatgccgtt
gccgcgctgaccaaacgttatggcgggttgctgtggggtgagcacggcaagggcttgcgc
tcggaatacgtgcccgagtacttcggcgaactgtacccggcgttgcagcgcctgaagggc
gcctttgacccgcacaaccagctcaacccgggcaagatctgcacgccacttggcagcgca
gagggcctgaccccggtcgatggcgtgaccctgcgcggcgaccttgaccgtaccattgac
gagcgcgtttggcaggacttccccagcgccgtgcactgcaacggcaatggcgcctgttac
aactatgaccccaacgacgccatgtgcccgtcgtggaaggccacccgcgaacgccagcat
tcgcccaaggggcgcgcctcgctgatgcgcgagtggctgcgcctgcagggcgaggcgaac
atcgatgtgctggctgcggcgcgcaacaaggtgtcgtggctcaagggcctgccggcgcgt
ctgcgcaacaaccgtgcgcgcaaccagggccaggaagacttctcccatgaagtgtacgac
gctatggccggctgcctggcgtgcaagtcgtgcgccgggcagtgcccgatcaaggtcaat
gtgccggatttccgctcgcgcttcctcgagctttaccacggtcgctaccagcgcccgctg
cgtgactacctgatcggctcgctcgagttcaccatcccctacctggcgcacgcgccgggg
ctgtacaacgcggtgatgggctcgaagtgggtgagccagctgctggccgacaaggtgggc
atggtcgacagcccgctgatcagccgcttcaacttccaggctaccctgacccgttgtcgc
gttggcatggccacggtgccggccctgcgcgagctgaccccggcccagcgcgagcgcagc
atcgtgctggtgcaggacgccttcacccgctacttcgaaacgccgctgctgtcggccttc
atcgaccttgcccaccgcctgggccaccgggtattcctggcgccgtacagcgccaacggc
aagccgttgcacgtacagggtttccttggcgcgtttgccaaggcagcgatccgcaacgcc
acgcagctcaaggccctggccgattgcggtgtgccgctggtggggctggacccggcgatg
acgctggtgtatcgccaggagtatcagaaagtgccaggcctggagggttgcccgaaggtg
ctgctgccgcaggaatggttgatggatgtgctgcccgagcaggcgcctgccgcaccgggc
agcttccgcctgatggcgcactgcaccgagaagaccaatgtgccggccagcacccggcag
tgggagcaggtgttcgcccgtctggggctgaagctggtgaccgaggccaccggttgctgt
ggtatgtccggtacctatgggcacgaagctcgcaaccaggaaacgtctcggaccatattc
gagcagagctgggcgaccaagctggacaaggacggggagccgctggcaaccggttattcg
tgccgtagccaggtcaagcgcatgaccgagcggaagatgcgtcacccgcttgaggtggtg
ttgcagtacgctcagcgctga
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