KEGG   Pseudomonas alloputida: LU682_008150
Entry
LU682_008150      CDS       T09345                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10943  two-component system, response regulator FlrC
Organism
pald  Pseudomonas alloputida
Pathway
pald02020  Two-component system
pald02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:pald00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LU682_008150
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    LU682_008150
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pald02022]
    LU682_008150
   02035 Bacterial motility proteins [BR:pald02035]
    LU682_008150
Two-component system [BR:pald02022]
 Other families
  FlrB-FlrC (polar flagellar synthesis)
   LU682_008150
Bacterial motility proteins [BR:pald02035]
 Flagellar system
  Flagellar assembly proteins
   Others
    LU682_008150
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 AAA_5 AAA_16 MCM AAA FleQ HTH_20 HTH_30 MerR AAA_3 AAA_19 AAA_2 Mg_chelatase HTH_24 DUF2249 HTH_28 HTH_23 HTH_11 nSTAND3 Sigma70_r4_2 PDE8A_N AAA_22 HTH_1 AAA_14 HTH_17 HTH_Mga ATPase nSTAND6 AAA_7 Myosin_head
Other DBs
NCBI-ProteinID: WJR18777
LinkDB
Position
1755253..1756608
AA seq 451 aa
MAIKVLLVEDDRVLRQALGDTLEIGGFAYQAVGSAEEALEAVLEDAFSLVVSDVNMPGMD
GHQLLSQLRRQQPQLPVLLMTAHAAVERAVEAMRQGAADYLVKPFEPKALLNLVERHAAG
RVTGEEGPVACEPASRQLLELAARVARSDSTVLISGESGTGKEVLARYIHQQSPRAAQPF
VAINCAAIPDNMLEATLFGHEKGAFTGAIAAQAGKFEQAEGGTLLLDEISEMPMALQAKL
LRVLQEREVERVGGRKPISLDIRVLATTNRDLAGEVAAGRFREDLYYRLSVFPLAWRPLR
ERPGDILQLAERLLARHVAKMKHASVRLSPAARACLQAYAWPGNVRELDNALQRALILQQ
GGVIEAADFCLAGAIPLSAGTEPSLEVVADAGGLGDDMRRHEYQMIIDTLRAERGRRKEA
AERLGISPRTLRYKLAQMRDAGFDVEASLFG
NT seq 1356 nt   +upstreamnt  +downstreamnt
atggcaatcaaggtgctgctggtcgaggatgaccgcgtattgcgccaggcgctgggcgat
accctggaaatcggcggtttcgcctaccaggcagtgggcagtgccgaagaagcgctggag
gccgtactcgaagacgcgttcagcctggtggtcagtgacgtcaacatgcccggtatggat
gggcaccagttgctgagccagttgcgccgccagcagccacagttgccggtgctgttgatg
acggcgcatgccgccgtcgagcgtgcggtcgaggccatgcgccaaggcgccgccgactac
ctggtcaaaccgttcgagcccaaggcgctgctcaacctcgtggagcggcatgccgccggg
cgtgtgaccggcgaagaagggccggtggcctgcgagccggccagtcgccagttgctggag
ctggcggcccgtgtggcgcgcagtgactcgaccgtactgatttccggcgagtccggtact
ggcaaggaagtgctggcgcgctacattcaccagcagtcgccgcgtgcggcgcagcccttc
gtggcgatcaactgcgcggcgatccccgacaacatgctcgaggccaccctgttcggccac
gagaagggcgccttcaccggcgctatcgcggctcaggctggcaagttcgagcaggccgaa
ggcggcaccttgctgctcgacgaaatctcggaaatgcccatggccttgcaggccaagctg
ctgcgtgtgctgcaggaacgcgaggtggagcgggtaggcgggcgcaagccgatcagcctg
gacattagggtgctggccaccaccaaccgcgacctggccggcgaagtggcggctgggcgc
ttccgcgaagacctgtactaccgcctgtcggtgttcccgctggcctggcgcccgctgcgt
gagcggccgggcgatatcctgcagttggccgagcgcctgctggcgcgccatgtggccaag
atgaagcatgcctcggtgcgcctctcgccagcggctcgggcctgcctgcaggcatatgcc
tggccgggcaacgtgcgcgaactggacaacgccctgcagcgggcgttgattctgcagcag
ggtggcgtgatcgaggcggcggatttttgtctggcaggcgccattccattgtcggctggc
accgagccatctctcgaggtggttgctgatgccggcggcctgggggatgacatgcgtcgt
cacgagtaccagatgatcatcgacaccctgcgcgccgagcgcggccgccgcaaagaggcg
gccgaacgcctggggatcagtccgcggacgttgcgctacaagctggcgcagatgcgcgat
gccgggtttgacgtcgaggccagcctgttcggctga

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