Pseudomonas alloputida: LU682_009895
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Entry
LU682_009895 CDS
T09345
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pald
Pseudomonas alloputida
Brite
KEGG Orthology (KO) [BR:
pald00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pald03016
]
LU682_009895
Enzymes [BR:
pald01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LU682_009895
Transfer RNA biogenesis [BR:
pald03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LU682_009895
Prokaryotic type
LU682_009895
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
WJR19111
LinkDB
All DBs
Position
complement(2176588..2177547)
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AA seq
319 aa
AA seq
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MDLLFLGTSAGVPTKARNVSATAVIEASGSHWYLVDCGEGTQHRLLHTPLSIRDLRAIFI
THVHGDHCFGLPGLLASAGMSGRTQPLEVILPAVLHDWVRQGLVASDTFLPFELRLLPVE
ELIAWRSETLQVTTVQLSHRVPSVGFVFTEINPEPRLDIQRLDAEGITRGPLWGELAKGL
TVTYDGQLLNGNDYLRPSRPPRRVIVCGDNDKPELLAAVARGADVLVHEATFTQAVVERT
GGTFGHSTAAEVARFAEAAGVRNLVLTHFSARYQNDPRRSPHIDNVRDEALAHYSGQLTL
AQDLQRYHLGRNGLLEASA
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggacctgctgttccttggcacctccgccggggtgcccaccaaggcacgcaatgtcagc
gccacagccgtgatcgaagccagcggcagccactggtatctggtcgattgcggcgaaggc
acccagcaccgcctgctgcacaccccgctttcgatccgcgacctgcgcgcgatcttcatc
acccacgtgcatggtgaccattgcttcggcctgcccggcctgctggccagcgcgggcatg
agcgggcgcacccagccgctggaagtgatcctgcccgccgtactgcacgactgggtacgc
cagggcctggttgccagcgacaccttcctgccgttcgagctgcgcctgttgcccgtggaa
gagctgatcgcatggcgcagcgagaccctgcaggtgaccaccgtgcaactgtcgcaccgg
gtgcccagcgtgggtttcgtattcaccgaaatcaaccctgagccacgcctggacatccag
cgcctggacgccgagggcataacgcgtggtccgctgtggggcgagctggccaaggggttg
accgtgacgtacgacgggcaactgctgaacggcaacgactacctgcgcccttcgcgtccg
ccccggcgggtgatcgtgtgcggggacaacgacaagccagaactgctggcagccgtcgcc
aggggtgcggatgtactggtgcacgaagccaccttcacccaggcggtggtcgaacgcacc
gggggcacgttcggccacagcaccgccgctgaggtggcacgctttgccgaggccgctggc
gtgcgcaacctggtactgacgcatttcagcgcccgctaccagaacgacccacggcgcagc
ccgcacatcgacaacgtgcgcgacgaggccctcgcccattacagcgggcagttgaccctg
gcgcaggacctgcagcgctatcaccttggccgtaacggccttcttgaggccagtgcctag
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