Pseudomonas alloputida: LU682_010305
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Entry
LU682_010305 CDS
T09345
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pald
Pseudomonas alloputida
Pathway
pald02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pald00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LU682_010305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pald03021
]
LU682_010305
Transcription machinery [BR:
pald03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LU682_010305
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
HTH_7
Sigma70_r4
HTH_23
HTH_24
HTH_11
PhyR_sigma-like
GerE
HTH_Tnp_ISL3
HTH_17
HTH_29
Rv2175c_wHTH
HTH_AsnC-type
LacI
HTH_38
HTH_3
HTH_IclR
HTH_20
HTH_DeoR
AbiEi_3
MerR
HTH_Tnp_4
HTH_40
TnsD
DUF8073_M
HTH_Crp_2
HTH_28
HTH_36
Motif
Other DBs
NCBI-ProteinID:
WJR19184
LinkDB
All DBs
Position
complement(2260592..2261095)
Genome browser
AA seq
167 aa
AA seq
DB search
MSTTDGATSTEFHTLYVNHHGWLQGWLRRKLGCCASAADLTQDTFVRLLAKHEPIQILDS
RAVLVTVARSVLSNHFRRQKLERAYLEVLASVPEQLMPSLEEQAILLQTLQELDRLMDGL
EVPVRQAFLWSQLDGMAHAEIAERLGVSVTTVKRYIIKAGVQCCFAE
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgactgacggtgctacctcaacggaatttcacaccctatatgtcaatcaccat
ggttggttgcaagggtggctgagacgcaagctgggctgctgcgccagcgccgcagacctt
acgcaggacacgttcgtacgcctgctggccaagcatgaaccgatacagattctcgattcg
cgcgccgttttggtgaccgttgcgcgcagcgtcttaagcaaccacttccgccggcagaag
ctggagcgcgcctaccttgaagtgcttgccagcgtccctgagcaattgatgccttcgctg
gaagagcaggcgatcctgttgcagaccttgcaggaactcgaccgtctgatggacgggctg
gaagtcccggtgcgtcaggccttcctctggtcccagcttgacggcatggcgcatgccgag
attgccgagcggctcggcgtatcggtaaccaccgtcaagcgctacatcatcaaggccggt
gtgcaatgttgcttcgccgaatga
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