Pseudomonas alloputida: LU682_011895
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Entry
LU682_011895 CDS
T09345
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
pald
Pseudomonas alloputida
Brite
KEGG Orthology (KO) [BR:
pald00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pald03009
]
LU682_011895
Ribosome biogenesis [BR:
pald03009
]
Prokaryotic type
ribosomal protein modification factors
LU682_011895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Sin3a_C
Motif
Other DBs
NCBI-ProteinID:
WJR19488
LinkDB
All DBs
Position
2586999..2589185
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AA seq
728 aa
AA seq
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MEIKVNFLDNLRLEAKFDDFTVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCQ
TRDIPTENIRLSQNNIVDPENRYNQIFKIQVELPEDISDKDRQGILRSIDRCTVKKVVQT
GPEFVIEVVDNLDADAQGLLMPVSDTSTYIPGKDLPLEQTIANMSGILAGLGMKIEIASW
RNIVPNVWSLHVRDAQSPMCFTNGKGATKEAALASALGEFIERLNCNFFYNDQFWGEDLA
NAPFVHYPNEQWFKPGPRDALPAEILDEHCLAIYNPDGELRGSHLYDTNSGNTARGICSL
PFVRQSDQQVVYFPSNLIENLFLSNGMSAGNTLAEAQVQCLSEIFERAVKREILEGELCL
PDVPQEVLAKYPAILAGIQGLEEQGFPVLVKDASLGGEFPVMCVTLMNPRTGGVFASFGA
HPSLEVALERSLTELLQGRSFEGLNDLPQPTFESHALTEPNNFVEHFIDSSGVVSWRFFS
AKADFEFVEWDFSGHGEDSNQQEAATLFGILEDLGKEVYMAVYDNLGATACRILVPGYSE
IYPVEDLIWDNTNRALSFRADILNLHSLDSRSLKLLLKRLDNCDVDDYTTITTLIGVEFD
ENTVWGQLTILELKLLICLAVQRFEDAKELVEAFLQFNDNTVDRGLFYQALNVVLEVQLD
DELEMDDYEANFRRMFGNARMDAVLGSVDGSVRFHGLTPTSMKLEGLDRHLRLIDSYKKL
HAARAKFA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaggtcaattttctcgacaatctccgtctcgaagccaaattcgatgacttc
acggtgatcgccgaccaacctatccgctacaaaggcgatggttcggccccaggcccgttc
gactatttcctggcgtcttcggccttgtgcgcggcttacttcgtcaagctgtactgccag
acccgcgatattcccaccgaaaatatccgcctgtcgcagaacaacatcgtcgacccggaa
aaccgctacaaccagatcttcaagatccaggtcgaactgcccgaagacatctccgacaag
gaccgtcaaggcatcctgcgctccatcgaccgctgcacggtaaaaaaggtggtgcagacc
ggccctgagttcgtgatcgaagtggtcgacaacctcgatgccgatgcccaagggttgctg
atgccggtgtcggacaccagcacctatatccccggcaaggacctgccgctggagcagacc
attgccaacatgtcgggcatcctcgccgggttggggatgaagatcgagatcgcctcgtgg
cgcaacattgtccctaacgtctggtcgctgcacgtacgcgatgcgcagtcgccgatgtgc
tttaccaacggtaaaggcgccaccaaggaggctgcgctggcctcggcgctgggcgagttc
atcgagcgcctcaactgcaacttcttctacaacgaccagttctggggcgaagacctggcc
aacgccccgttcgtgcactacccgaacgaacagtggttcaagccgggcccgcgcgacgcg
ctgccggccgagatcctcgatgagcactgcctggcgatctacaaccctgacggggagctg
cgtggttcgcacctgtatgacaccaactcgggtaacacggcgcggggtatctgttcgctg
ccgttcgtgcgccagtccgaccagcaggtggtgtacttcccgtccaacctgatcgaaaac
ctgttcctcagcaatggcatgagcgcgggcaacaccttggccgaggcgcaggtgcagtgc
ctgtcggaaatcttcgagcgcgcggtgaagcgcgaaatcctcgagggcgagttgtgcctg
ccggacgtgccgcaagaggtgctggccaaatacccggcgatcctcgctggcatccagggc
ctggaagagcaaggcttcccggtgctggtcaaggatgcgtcgctggggggcgagttcccg
gtcatgtgcgtgaccttgatgaacccgcgcacgggtggcgtgtttgcctcgttcggtgcc
cacccgagcctggaagtggcgctggagcgcagcctcaccgaactgctgcagggccgcagc
ttcgagggcctgaacgacctgccgcaacccaccttcgaaagccatgcgctgaccgagccg
aacaacttcgtcgagcatttcatcgactctagcggcgtggtgtcgtggcgcttcttcagc
gccaaggccgacttcgaattcgtcgagtgggacttctccgggcacggcgaggactccaac
cagcaggaggccgcgaccctgttcggcatcctcgaagacctgggcaaggaagtgtacatg
gcggtgtacgacaaccttggcgccaccgcgtgccgcatcctggtgccgggctattcggaa
atctacccggtcgaggacctgatctgggacaacaccaaccgcgccttgtcgttccgtgcc
gacatcctcaacctgcacagcctcgacagccgctcgctgaagctgctgctcaagcgcctg
gacaactgcgatgtggatgactacaccaccatcaccacgctgatcggtgtggagttcgac
gaaaacacagtgtggggccaactgaccattctcgaactgaagctgctgatctgcctcgcg
gtgcagcgtttcgaggatgccaaggaactggtcgaggcattcttgcagttcaacgacaac
accgtagaccgcggcctgttctaccaggcgctgaacgtggtgctggaagtgcagttggat
gacgaactggagatggatgactacgaagccaacttccgccgtatgttcggcaatgcgcgc
atggatgcggtattgggctcggtggacggcagtgtccgcttccatggcctgaccccgacc
agcatgaagctcgaaggccttgatcgccacctgcgcctgatcgacagctacaagaagctg
cacgcggcccgggccaagttcgcctga
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