Pseudomonas alloputida: LU682_012120
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Entry
LU682_012120 CDS
T09345
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pald
Pseudomonas alloputida
Pathway
pald02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pald00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LU682_012120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pald03021
]
LU682_012120
Transcription machinery [BR:
pald03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LU682_012120
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
PhyR_sigma-like
HTH_23
DUF6362
Motif
Other DBs
NCBI-ProteinID:
WJR19529
LinkDB
All DBs
Position
2645566..2646078
Genome browser
AA seq
170 aa
AA seq
DB search
MIDAAPPPEPGLPALYREHRGWLEAWLRRRMGNAWDAADLSQDTFLRILASAQPLADIRE
PRAYLLTVGKRLLSNFHQRRSLEQAYLDALAQLPEQHVPSPEQRWVLLETLQALDELLDD
LKPAIRKAFLWSQLEGLGYAEIGQRLGVCQRSVKRYMAQAYEHCLLAELQ
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacgccgcgccgccaccggagcctggcctgcctgccctgtaccgggagcatcgc
ggctggcttgaagcctggctgcgccggcgtatgggcaatgcctgggatgccgccgacctc
agccaggatacttttctgcgcattctggccagcgcccagccgctggcagacatacgcgaa
ccgcgtgcctacctgctgactgtgggcaagcgtttgctcagcaacttccaccagcgacgt
agcctggagcaggcctaccttgatgcgttggcgcagttgcccgagcaacacgtgccgtcg
ccagaacagcgctgggtactgctcgaaaccctgcaagcactggatgaattgctcgacgac
ctcaagccggcgatacgcaaggcctttctctggagccagctggaaggcttgggctacgcc
gaaattggccagcgcctgggcgtctgccagcgctcagtgaaacgctacatggcgcaggct
tacgaacattgcctgttggccgagttgcaatga
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