KEGG   Pseudomonas alloputida: LU682_013085
Entry
LU682_013085      CDS       T09345                                 
Symbol
tssI
Name
(GenBank) type VI secretion system tip protein TssI/VgrG
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
pald  Pseudomonas alloputida
Pathway
pald03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pald00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    LU682_013085 (tssI)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pald02044]
    LU682_013085 (tssI)
Secretion system [BR:pald02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   LU682_013085 (tssI)
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V Gp5_C Phage_phiTE_241_C OB_DEPS-1_2nd
Other DBs
NCBI-ProteinID: WJR19717
LinkDB
Position
complement(2872115..2874292)
AA seq 725 aa
MPSQSDLRFTFQPLVGRSEFEVVSFELDEAISSPFRLQLELVSFEDDVDFAQLLDKPVLF
TLWQGERPLRYVHGLVSTFSQGETGFDRTRYRALVEPVLARAGLRSNWRIFQQKTVPQIL
EIMLKRQGVNAYELKCLDPHQVREFCVQAGETDLDFMARLAAEEGIVYRFDHTPKQHLLI
ITDRLLALGQISRGAIKTDDEDEGFHNDDVGPDQVLYRSVGGGDQARPCLRRLRYSEQVR
TARQVQRDYTFTHPQYRQEHQAYDNSNTHQSLNYERFDYPGRYKRDAVGVPFTATRLTAL
RHDARIAEVEGDDVRLQPGLSFTLIEHPREDLNVHWRTVSVHHEGTQFTSLQEEAADSQQ
GTRYKQEALLVPGRTEWRPAPLPKPRIDGPHMATVVGPKGEEIYCDQWGRVKVSFPWDRE
SENNEFSSCWVRVSQGWAGGSWGSMAIPRIGQDVIIQYVNADPDQPMITGRTYCGNQLPP
YDLPEHKTRMTIKSQTHKGEGFNELRFEDELGRQEVFIHAERDQNNIVKHDETTRVGNDR
TERVERDETISIGQDRREDIARDESVGIGQNRVHEIGNDDSLSIGRNHRITTGKDRIEQV
GNHRQDITKANHTVEIGGHREQVVAGHSTLQTGEAIRHTTKVYDIQVSESLTIRSPAGLL
RVDGAGITLDGLALAFKGPVSQQATGSNRVTSTSGVPAPGEPICLSCLLKAIADGHTIIR
MEGAS
NT seq 2178 nt   +upstreamnt  +downstreamnt
atgcccagccaatccgatctgcgcttcactttccagccgctggttggccgtagcgagttt
gaggtggtgtcgttcgaactggacgaagccatcagctccccgttccgactacaactggag
ctggtcagtttcgaagacgatgtcgacttcgcccagctcctcgacaaaccggtgctcttc
accctctggcagggtgagcgcccgttgcgctacgtgcacggcctggtcagcaccttcagc
cagggagaaacaggcttcgatcgcacccgttaccgggcactggtcgagcccgtgctggcc
cgcgccgggctgcgctcgaactggcgcatcttccagcagaaaaccgtgccgcagattctc
gagatcatgctcaagcgccagggcgtgaatgcctacgagctcaagtgtctcgacccgcat
caggtgcgcgaattttgcgtgcaggccggtgaaacagacctcgacttcatggcccgcctg
gccgccgaggaaggcattgtctaccgcttcgaccacacgccgaaacagcacttgctaatc
atcactgaccggctgctggcgctgggccagatcagccggggggccatcaagaccgatgat
gaggatgaagggtttcacaatgacgacgtgggccccgatcaggtgctgtaccgatccgtt
ggaggcggcgatcaggccaggccttgcctgcggcgcttgcgttacagcgaacaggttcga
acagcgcggcaggtgcaacgggactacaccttcactcatccacaataccgtcaggaacac
caggcttacgacaatagcaacacccatcaatcgctgaactatgagcgcttcgactacccc
ggccgatacaagcgtgatgcggtcggggttccgttcactgccacccgcctcacggccctg
cgccatgatgcacgcattgccgaagtggaaggcgacgatgtgcgcctgcaaccggggctg
agcttcaccctcatcgagcacccgcgtgaagacctcaacgtgcactggcgcacggtcagc
gtgcatcacgaaggcacccagttcaccagcctgcaggaagaggccgccgactcgcagcaa
ggcacccgctacaaacaggaagcattgctggttcccggcaggaccgaatggcgcccggcc
cccctgcccaagccacgcatcgacggcccgcacatggcgacggtggtcgggcccaagggc
gaggaaatctattgcgaccaatggggccgggtgaaagtgagctttccttgggaccgggaa
agcgaaaacaacgagttcagctcctgctgggtgcgcgtgtcgcaaggttgggcggggggc
agctggggttcgatggccatcccgcgcatcggccaggatgtgatcatccagtacgtcaac
gccgacccggaccagccgatgatcaccgggcgcacctattgcggtaaccagttgccgccc
tatgacctgcccgagcacaagacgcgcatgaccatcaagagccagacccataaaggcgaa
ggcttcaacgagctgcgcttcgaggatgaactgggtcggcaggaggtgttcattcatgcc
gagcgggaccagaacaacatcgtcaagcacgacgaaaccacacgcgtgggtaacgatcgt
accgaacgcgtcgaacgagacgagacgatttcgatcggtcaggaccgtcgcgaagacatt
gcccgtgacgagtctgttggcatcggccagaaccgggtacacgaaatcggcaacgacgac
agcctgagcatcggccgcaaccacaggatcaccacaggcaaggaccgaatcgaacaggta
gggaaccaccggcaggacatcaccaaggcaaaccacacggtagaaatcggcggccaccgc
gaacaggtcgttgccggtcacagcacgttgcaaacgggcgaagccatccggcacaccacc
aaggtttatgacatccaggtcagcgaaagcctgacgatccgcagccccgcagggcttttg
agagtagacggcgccggtataacgctggacggcctggcgctggccttcaaagggcctgtc
agccagcaggctacgggtagcaatcgcgtcacttcaacgtctggcgtaccagcgcctggc
gaacccatttgcctcagctgcctgctcaaggcgatcgccgacggccacaccatcattcgc
atggaaggagcaagctga

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