Pseudomonas alloputida: LU682_015170
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Entry
LU682_015170 CDS
T09345
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
pald
Pseudomonas alloputida
Pathway
pald02025
Biofilm formation - Pseudomonas aeruginosa
pald03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pald00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LU682_015170 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
LU682_015170 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pald02044
]
LU682_015170 (tssH)
Secretion system [BR:
pald02044
]
Type VI secretion system
Imp/Vas secretion system core components
LU682_015170 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
ClpB_D2-small
AAA_16
AAA_22
Clp_N
nSTAND3
TniB
ATPase_2
Sigma54_activat
NACHT
AAA_7
AAA_25
AAA_14
Zeta_toxin
AAA_24
T2SSE
Hpr_kinase_C
ODAD1_CC
SLFN-g3_helicase
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
WJR14540
LinkDB
All DBs
Position
3317657..3320254
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AA seq
865 aa
AA seq
DB search
MNLKSLFAKLNETSRTATESAAALCLSEHHYEVEVEHLLLQLLDNNDSDLAPILRHYQVV
AERLQAQLVTALGTFKKGNTRTPALSPHITRMIEQAWLLASIEYGVGQVRSAHLLQALLD
DAELRRVVIASAPELEKINADDLRLNLAALVEGSAESRQASPLASPAAPVSTSSKASGKT
PALDQYTVNLTQSAREGRIDPVLGREFEVRQMVDILTRRRQNNPILTGEAGVGKTAVVEG
LALRIAQGDVPAVLKDVALHTLDLGLLQAGAGVKGEFENRLKAVIEEVKRSLHPIILFID
EAHTLIGSGGQAGQNDAANLLKPALARGELRTIAATTWAEYKKYFEKDAALARRFQVVKV
EEPDEDKAIHMLRGLLGKMREHHKVAVMDEALVQAVRLSNRYITGRQLPDKAVSVLDTAC
ARIALAQSSLPGALEDCRRQIDNLQAEIDVLGHEAGKGHDHARRLESLQAALQAEQQQEQ
QLNAQWQQELELVEQLKALDAANDADAQQLNTLRAELARVQGDQPLVHALVDSGAIAQVI
SGWTGIPLGKMLRDEIDTVQRLPALLGERVLGQDHALHEIGKRIKISRARMEDPNKPIGV
FLLLGPSGVGKTETALALADTLYGGERNLITINMSEYQEAHTVSSLKGSPPGYVGYGEGG
VLTEAVRRKPYSVVLLDEVEKAHPDVLELFFQVFDKGVLDDGEGREINFRNTVIILTSNT
GTERIMQTCLNATELPTPEAIVEDLRDQLNHVFKPAFLGRLSIVPFYPVQDQILERIVAL
KLERIAKRFARNHQAELSYDQALVKAIAARCTEVDSGARNIDNILSQTLMPELAQRVLER
MAQDAPIQHLAIELGSDGDFAYRLA
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
gtgaacctgaagtctctgttcgccaagctcaacgaaaccagccgcacggccaccgaaagc
gcggcggccctgtgcctgtcggagcaccattacgaggtggaagtggagcacctgctgctg
cagttgctcgacaacaacgacagcgacctggcgccgatcctgcgccactaccaggtcgtc
gccgaacgcctgcaagcgcagctggtcaccgccctgggcaccttcaagaaaggtaatacc
cgcaccccggcgctgtcgccgcacattacccgcatgatcgagcaagcctggttgctggcc
tcgatcgaatacggcgtaggccaggtgcgcagcgctcacctgctgcaggctctgcttgac
gatgctgaactgcgtcgcgtggtgatcgcctcggcaccggagctggaaaaaatcaacgcc
gatgacctgcgcctgaaccttgccgcgctggtggagggtagcgccgagtccaggcaggcc
agcccgctggccagcccagcggcgccagtgagcacgtcgagcaaggccagcggcaagacc
ccggcgctggaccagtacacggtcaaccttacccaaagcgcccgcgaaggccgcatcgac
ccggtgctgggccgtgagttcgaagtacggcagatggtcgacatcctcacccgccgccgg
cagaacaacccgatcctcacgggcgaagccggggtcggcaaaaccgccgtggtcgaaggc
ctggcgctgcgcatcgcccagggtgacgtgccggcggtgctcaaggacgttgccctgcac
accctcgacctgggcctgttacaggccggcgccggggtcaagggcgagttcgagaaccgc
ctcaaggctgtgatcgaagaggtcaagcgcagcctgcacccgatcatcctgttcatcgac
gaagcccacaccctgatcggctccggcggccaggccgggcagaacgatgccgccaacctg
ctcaagccggccctggcccgtggcgagttgcgcaccatcgctgccactacctgggccgaa
tacaagaagtacttcgagaaggacgccgccctcgcccgccgcttccaggtggtcaaagtg
gaagagcccgacgaagacaaggccattcacatgctgcgcggcctgctcggcaagatgcgc
gagcaccacaaggtggcggtgatggacgaagcgctggtgcaggcggtacgcctgtccaac
cgctacatcaccggccgccagctgcccgacaaggcggtcagcgtgctcgacacggcctgc
gcgcgcattgccctggcgcaatcttcgctgcccggcgcactggaagactgccgccggcag
atcgacaacctgcaggcggaaatcgacgtgctcggccacgaagccggcaaggggcacgac
catgcccgccgcctggaatcgctgcaggctgccctgcaggccgagcagcagcaggaacag
cagctcaatgcccagtggcagcaggagctggaactggtcgaacagctcaaggcgctggac
gccgccaacgatgccgacgcccagcagctcaataccctgcgtgccgagctggcgcgcgtg
caaggcgaccagccactggtccacgcgctggtcgacagcggcgccatcgcccaggtcatc
agtggctggaccggcatcccgctgggcaagatgctgcgtgacgaaatcgataccgtgcag
cgcctgccggccctgcttggtgagcgcgtgctgggccaggaccacgccctgcatgagatc
ggcaagcgcatcaagatttcccgagcgcgcatggaagacccgaacaaaccgattggcgtg
ttcctgctgctcggccccagcggcgtcggcaagaccgaaaccgccctggccctggccgac
accttgtacggcggcgagcgcaacctgatcaccatcaacatgtccgagtaccaggaagcc
cacaccgtgtcgagcctcaagggctcgccacccggctatgtcggctacggcgaaggcggc
gtactgaccgaggcggtgcgccgcaagccgtacagcgtggtgttgctcgacgaggtggaa
aaagcccaccccgacgtgctcgaactgttcttccaggtgttcgacaagggcgtgctggac
gatggcgaaggccgcgagatcaacttccgcaacacggtgatcatcctcacctccaacacc
ggcaccgagcgcatcatgcagacctgcctgaacgccaccgagctgccgacgcccgaggcg
atcgtcgaagacctgcgcgaccagctcaaccatgtgttcaagccggccttcctcggtcgc
ctgagcatcgtgccgttctacccggtgcaggaccagatcctcgagcgcatcgtcgccctc
aagctcgaacgcatcgccaagcgcttcgcccgcaaccaccaggccgagctcagctatgac
caggcgctggtcaaggccatcgccgcgcgctgcaccgaggtcgacagcggcgcacgcaac
atcgacaacatcctgtcccagaccctgatgcccgaactcgcccagcgcgtgctcgagcgc
atggcccaggacgcgccgatccagcaccttgcgatcgagctgggcagcgatggcgatttc
gcctatcgcctggcctga
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