KEGG   Pseudomonas alloputida: LU682_015190
Entry
LU682_015190      CDS       T09345                                 
Name
(GenBank) type VI secretion protein IcmF/TssM N-terminal domain-containing protein
  KO
K11891  type VI secretion system protein ImpL
Organism
pald  Pseudomonas alloputida
Pathway
pald02025  Biofilm formation - Pseudomonas aeruginosa
pald03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pald00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    LU682_015190
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    LU682_015190
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pald02044]
    LU682_015190
Secretion system [BR:pald02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   LU682_015190
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical MMR_HSR1 FMN_red
Other DBs
NCBI-ProteinID: WJR14544
LinkDB
Position
3323085..3326888
AA seq 1267 aa
MKTLLRLLKSFWLLLPLLWLASLLICWLAAPLVPWLRHHVPEALAIISACFLLVIVLRQY
QRIRAEHNLENLLQIEVDRSWNATGEFRDQQVLRERLKHAITMLRTDRSAGGGGKAALSD
LPWYLVVGMSAAGKTSLLTHSGLSASIATANDSESGTQHCDWYFSPDAVMIDTAGRYLRD
DQSASEFSAFLRMLRKQRGKAAINGLVLVVSLPELLAANSDERNALAAQLVARVEEYAEC
LDANPPVYLMLSKTDQLPGFSQAFDGLDLHERQQPLGMTFGLSEIRTNGLHAVLQTRLKK
LQAHIRQHVDAQMIALGAEADSTLLNFPQYFAALSGVLEQFLEHFTRGHRGGAPLLLRGL
YFTSALQNGQQLGQVYEDVIADEFALQAAYDEQAGHVGKALGNRSYFITDTFRQVIFPDR
DLILYQSRLGRQAAFSPLLLGLAAATGLLFIGWQALSFANNRQWLDSLRGQLAHIEQAAD
REQQLAAGKGLEVLREQMANVEAHRLQGVPLQLGGGLYQGEAIHQVTRSAYLAQLRSQAL
EPIARSLQVQMRAFNTFANGINQELEFTPAPQPKKRNGKPLAPAIAARAKAALGNTRAGA
YAAKVNLATASDGAELSAATGGLSLSEEMLGRLDEQQVASIIEAYNTLKLYLLLTEPQAH
PDPAFVAASLPQAWASAAGEGTPADAGVIAENAPLYVQLLEQGQAPSLPRNEQLINETRQ
NLKSFMISSSLVDREYLRLQLESSRQFPALSLNDLVPQPGRALLYGTAGVPAIYTRQGWD
TFVKPELIKLVSGNLRNESDWVLDGEGGDALVQKANFVREFMTRYKRDYTQAWYKMVSSV
GVRHFADLASATRELGLLSDVQNSPVKNLLQAVNDNTQWDLPVKQAIPAPGTSRDDGFWS
KVTGLFDANDTLPANVAPALPAVDDGSLAKRFEPVARVFAENNAEGADSTIMDRYLAALR
KLKVRMNNIQRSQDVGKSSKQLISETLEGQPSEITTVRNYVESSVDTSQDGLSRSLQGLF
SLPIQYAWATLRDPAGEQIAKAWAQQIAKPWEQVMAHRYPIAGSSRNEASVKDLQRFVDP
DSGLLPAFKRNEIGNLAGGEGLGVGDGKGPALVNPGMLNSIDKASSVGQVIASLSDRDNG
FEIMLEPSANFTDIVFTLDGQEQHYRNGRSSWNRFAWPGTSTAPGARLDVVTLSGTRVTV
FDFPGRWGLLRMNESARVDDLDGIQQRFSWNTASGRVSLVVRNFGGVKLTDLGDVKALSA
LNSRGAQ
NT seq 3804 nt   +upstreamnt  +downstreamnt
atgaaaacattactgcgtctgttgaaaagtttctggttgctgctgccattgctgtggctg
gctagcctgttgatttgctggctggccgcgccgctggtgccgtggctgcgtcatcacgtg
cctgaagcgctggcaatcatcagtgcctgcttcctgctggtaatcgtgctgcgccaatac
cagcgtattcgcgccgaacacaacctggagaacctgctgcagatcgaggtcgaccgctcg
tggaatgccactggcgagttccgtgaccagcaggtgctgcgtgagcgcctgaagcacgcc
atcaccatgctgcgcaccgaccgctccgccggtggcggcggcaaggcggccctgtccgac
ctgccctggtacctggtggtcggcatgtcggcggccggcaagacctcgctgttgacccat
tccggcctgtcggccagcatcgctacggccaacgacagtgaaagcggcacccagcactgc
gactggtacttcagccccgacgccgtgatgatcgacaccgccgggcgctacctgcgcgac
gaccaatcggccagcgagttctcggcctttctgcgcatgctgcgtaagcagcgcggcaaa
gcggcgatcaatggcctggtcctggtggtcagcctgcccgaactgctggcggccaacagc
gatgagcgcaatgccctggctgcccagctggtggcccgggtggaagaatacgccgaatgc
ctcgatgccaacccgccggtttacctgatgctgagcaagaccgaccagttgccgggcttc
agccaggctttcgacggcctcgacctgcacgaacgccagcagccgctgggcatgaccttt
ggcctttcggaaatccgcaccaacggcctgcacgccgtgctgcagacgcgcctgaagaag
ctgcaagctcatattcgccagcacgtcgacgcgcagatgatcgccctcggtgccgaagcc
gacagcaccctgctgaatttcccgcagtacttcgccgccctcagcggtgtgctcgagcaa
ttcctcgaacacttcacccgcggccatcgcggcggtgccccgctgctgctacgtggcctg
tacttcaccagtgcactgcagaacgggcagcaactggggcaggtctatgaagacgtcatc
gccgacgaattcgccctgcaggccgcctacgatgaacaggccgggcacgtcggcaaggcc
ctgggcaaccgcagctacttcatcaccgacactttccgccaggtgatcttccccgaccgc
gacctgatcctttaccagtcgcgcctgggccgccaggctgcgttcagcccgctgctactg
ggcctggccgccgccaccgggttgctgttcatcggttggcaagcgctgtcgttcgccaat
aaccgccagtggctggacagcctgcgcgggcagctggcgcacatcgaacaggcagcagac
cgcgagcagcagctggccgcaggcaagggcctggaagtgctgcgtgagcagatggccaac
gtcgaggcccatcgcctgcagggagtgcccttgcagttgggtggcggcctgtaccagggc
gaggcgattcaccaggtgacccgcagcgcctacctggcgcagctgcgcagccaggcgctg
gaaccgatcgcacgcagcctgcaagtgcagatgcgggcgttcaataccttcgccaacggt
attaaccaggagctggaattcaccccggccccgcagccgaagaagcgcaatggcaagccg
ctggcccctgccattgcggccagggccaaggccgcgctgggcaacacccgcgctggcgcc
tatgccgccaaggtcaacctggccactgccagcgatggcgccgagctgtccgccgccacc
ggtgggctgtcactgtccgaagaaatgctcgggcgcctggacgagcagcaggtggcctcg
atcatcgaggcctacaacaccctcaagctgtacctgttgctgaccgagccccaggcccat
ccagacccggccttcgtcgctgccagcctgccccaggcctgggccagcgccgcaggcgaa
ggcaccccggccgacgctggcgtgatcgcagaaaatgccccgctgtacgtgcagttgctg
gagcagggccaggcgccgtcgttgccgcgcaacgaacagctgatcaacgaaacccggcag
aacctcaagtcgttcatgatctccagctcgctggtcgatcgcgaatacctgcgcctgcag
ctcgagtcgagccggcagttcccggcgctgagcctcaacgacctggtcccgcaaccaggc
cgcgcgctgctgtacggaaccgctggtgtgccggcgatctacacccgccagggctgggac
accttcgtcaagcccgagctgatcaagctggtgtcgggcaacctgcgcaacgagtcggac
tgggtgctggacggcgaaggcggcgatgccctcgtgcagaaggccaacttcgtgcgcgag
ttcatgacccgctacaagcgcgactacacccaggcctggtacaagatggtcagcagcgtt
ggcgtgcgccacttcgccgacctggcctcggcgacccgggagctggggctgttgagcgac
gtacagaactcgccagtgaagaacctgctgcaggcggtcaacgacaatacccagtgggac
ctgccggtcaagcaggccatcccggccccaggcaccagccgcgatgacggtttctggagc
aaggtcaccggtctgttcgacgccaacgacaccctgcctgccaacgtcgccccggccctg
ccggcggtggacgacggcagcctggccaagcgcttcgagccggtggcgcgggtgttcgcc
gaaaacaacgccgaaggcgccgacagcaccatcatggatcgctacctggccgccttgcgc
aaactcaaggtgcgcatgaacaacatccagcgctcgcaggatgtgggcaagagcagcaaa
cagttgatcagcgagaccctggaaggccagccgagcgagatcaccaccgtgcgcaactac
gtggaaagcagcgtcgacaccagccaggatggcctgtcgcgctcgctgcaggggctgttc
agcctgcccatccagtatgcctgggcgaccctgcgcgacccggccggcgagcagatcgcc
aaggcctgggcgcagcagatcgccaagccctgggagcaggtcatggcacaccgttacccg
attgccggcagcagccgcaacgaggcttcggtgaaagacctgcaacgcttcgtagatccc
gacagcggcctgctgccggccttcaaacgcaacgaaatcggcaacttggccggtggtgaa
ggtctgggtgtaggcgatggcaaggggccggcgctggtcaaccctggcatgctcaacagc
atcgacaaggccagctccgtgggccaggtgatcgccagcctgtcagaccgtgacaacggc
ttcgaaatcatgctggagccttcagccaacttcaccgacatcgtcttcaccctcgatggc
caggagcagcactaccgcaacggccgcagcagctggaaccgcttcgcctggccgggcacc
agcaccgcgccgggcgcgcgcctggacgtcgtcaccctgagcggcacacgggtcaccgtg
ttcgacttcccagggcggtggggcctgctgcgcatgaatgagagcgctcgggtcgacgac
ctggacggcattcagcaacgcttcagctggaacaccgccagcggccgcgtaagccttgtc
gtgcgcaacttcggcggggtcaagctgaccgatctgggtgacgtcaaggccctgagcgcc
ctcaacagcaggggcgcgcaatga

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