KEGG   Pseudomonas alloputida: LU682_015205
Entry
LU682_015205      CDS       T09345                                 
Name
(GenBank) type VI secretion system tube protein Hcp
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
pald  Pseudomonas alloputida
Pathway
pald02025  Biofilm formation - Pseudomonas aeruginosa
pald03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pald00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    LU682_015205
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    LU682_015205
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pald02044]
    LU682_015205
Secretion system [BR:pald02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   LU682_015205
SSDB
Motif
Pfam: T6SS_HCP
Other DBs
NCBI-ProteinID: WJR14547
LinkDB
Position
3330429..3330947
AA seq 172 aa
MAFDAYIQIDGIPGEVLDEKHKDWIEVLGYEYGATQATSATASSSGGASSERVALSDFKI
RKAVDKASAKLFEHCCTGKHIAKLKLNVNRAGGDKVTYLTIDMEEVVVSSVKFVAGGNQS
GEDKAVSDLPVEEISFNFARIKTTYTQQNRTDGQAGGNIVGGWDRTANKVFA
NT seq 519 nt   +upstreamnt  +downstreamnt
atggcatttgacgcgtatatccaaatcgacggcatcccaggcgaagtactggatgaaaaa
cacaaggactggatcgaagtgctgggctacgagtacggcgccacccaggctacgtcggca
accgccagctcctcgggcggtgcgtcctccgagcgcgttgccctgagcgacttcaagatc
cgcaaggcagtcgacaaggcatcggccaaactgttcgaacactgctgcaccggcaagcac
atcgccaagctgaagctgaacgtgaaccgtgccggtggcgacaaggtcacctacctgacc
atcgacatggaagaagtggtggtctcttcggtcaagtttgtcgccggtggcaaccagagt
ggtgaagacaaggcggtcagcgacctgcccgttgaagaaatcagcttcaactttgcccgc
atcaagaccacctacacccagcagaaccgcaccgacggccaggccggcggcaacatcgtg
ggtggctgggaccgcaccgcgaacaaagtgtttgcctaa

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