Pseudomonas alloputida: LU682_017090
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Entry
LU682_017090 CDS
T09345
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pald
Pseudomonas alloputida
Pathway
pald03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pald00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LU682_017090 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pald03400
]
LU682_017090 (xth)
Enzymes [BR:
pald01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LU682_017090 (xth)
DNA repair and recombination proteins [BR:
pald03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LU682_017090 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
WJR14905
LinkDB
All DBs
Position
complement(3710852..3711649)
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AA seq
265 aa
AA seq
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MKALKIATFNINGIRSRLPALLAWLEREQPDIACLQELKAADQQFPRAELEAAGYGSLHH
GQPSWNGVAILVRGSDPLEVRRGLPGLEEDSQSRYLEAAAHGVLVACLYLPNGNPLPGPK
FDYKLHWFECLIQHARSLQESGHPTLLAGDFNVVPTDMDIYNPRSWLKDALLQPESRACY
QRLLDQGWLDAIRHLYPDERVYTFWDYFRNHWARNAGLRIDHLLLNRELAPYLKRAGVDA
WVRNQAKASDHAPVWIELGTRRARS
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgctgaagattgccaccttcaacatcaatggcatccgcagccgcttgccggcg
ctgctggcctggctggagcgggagcagcccgacattgcctgcctgcaggagctgaaggcg
gccgatcagcagttccctcgcgcagagctggaggcagcaggctatggcagccttcatcat
gggcaaccgtcatggaacggcgtggccattctggtgcggggcagtgatccgctcgaggtt
cgccgcggcttgcccggcctggaagaggacagccagagccgctatctggaagctgcggca
cacggggtgttggtcgcttgtctctatctgccgaacggcaacccgctgcccgggcccaag
ttcgattacaagctgcactggttcgaatgcctgatccagcatgcgcgcagcctccaggaa
agtggccaccccacgctgctggcaggggatttcaatgtcgtgcccaccgacatggacatc
tataacccgcgttcctggctgaaggacgcactgctgcagcctgagtcgcgagcgtgttac
caacgactgcttgaccagggctggctcgatgccatacgccatctgtacccggacgagcgt
gtctacaccttctgggactattttcgtaaccactgggcccgcaatgccgggttgcgaatc
gatcacctgttgctcaatcgcgagcttgcgccttatctgaaacgggcgggtgtcgatgca
tgggtgcgcaaccaggccaaggccagcgaccatgcgcccgtctggatcgagctgggtacg
cgtcgtgctcggtcatag
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