Pseudomonas alloputida: LU682_019880
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Entry
LU682_019880 CDS
T09345
Name
(GenBank) NEL-type E3 ubiquitin ligase domain-containing protein
Organism
pald
Pseudomonas alloputida
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NEL
DUF6543
LRR_8
LRR_4
Motif
Other DBs
NCBI-ProteinID:
WJR15427
LinkDB
All DBs
Position
complement(4285773..4290218)
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AA seq
1481 aa
AA seq
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MIINATGHDRFIGARLPEWLKRASRGQINTLRTSLNAHHASQARLSGLTLELLPLQQFAE
KHLAALLDAPLPDGQVFAQLEWLRVAPRFGTLPGTLQQTYGYSQTRENGLLRLMRNFAAN
TRYYEGTGLVLSGSDKPLNASLEALITACRNLDVGQRYQDALQRIFPPATQAVLAEDKRS
GLKLATELAALQGNISVDVQLALREVVDPAQEGRQKGLEGKPMLLRAIGRPVVDGLLIHL
QDKAGNERGIVLYLPGDPRQALRFFDNVASMNSTVAMLLQDPGYWQFFTQLISLEHRAGF
VSTLGKRLKDKLPDLELEGETPGGGVFTQLATRQVQRVKEDARLLLVPTADADSRAVSAR
HAEWKAAGLDLVNLAGLFIPAVGGVLLGQVVAQTCAEVFEGMRDWSKGHQHEALQHLLGV
AETLAATAATVAGVSFVRSAFVAGLEPVSLGNGRSRLWQFNARNYRSLPGPVDLLEEERG
GEAGRRWVRIDGRYLEVHQPVVDGPYRLRHAASEGGYGPVVLHNGERGWQLMREQPLSWQ
APARMLDALWPQLSPVDAHQAEQIMRVAGIDADLLRGVLVENRPAPVSLGQTLRAFQAHA
RIERFFQRVRLKALMPSDRELLAWCEARPGVGAGLEQMQVHEAGLRPQLFARLTEQSLAA
DPLSMLVKRDFPGLPSAYINEVTGQAHELEHQMARVERRLPLPCAKSARSLLRLARLSRG
LAGLYLSTAYSDVTGELALALLDSFELEQLDLDLRDRGLDGRSIRRLGSGGRTEARRIVV
RHEGRFLIYNGSGLPHVFIADEPGCIFEALSAALTSEQRAAMQLVGSAAARQLREKLLAR
LPATHWDIARMLGWPEEQAWLNPGRRMDDGRVGYPLSGRPGAAPRDERAIIRDQLRSLYP
GLDEAALDVELARVQQGPQPVFERLVELQEAHDQLVLYLNRWVGAELQEGRRAARRLTAD
SILRAWRLQGEPVSAGEGQTQGQRLSMSGLSLRTLPALPPHIDFHRITLLSVNDTLITDI
PADFLRPFTALTHLNLNNNALMRLPTGIAHLPNLQSLRLAHNEIRLDAQAISVLHGLSNL
VHLDLSHNRLEALDMSFHQLSRLTSLNLRHCRLGSWPRRLELCGLLERADLRNNQLREVP
TEIQLMPYAFRQAILMEDNPLSVMQQRRLYALDVIEEHRHSPEQLGSVDLARARTRWVGH
TDATVQAEREAVWLRLLEQAGSSGLFRLLARLEMTADYSQAGEGRDALVDGVWTLLATLD
GDPVLCRRIFERAGLPLSCSDAVASHFSALQVLVRQAQAEAAAVNPERRGELLELGRQLF
RLDQLEGIAYQDGRQRLAASEHVDQLALGLAYRVQLRSRLRLPNQPYAMRYPDAVALTQA
QVEDAFLRVTRAQTIEGLTDSLSQRAFWRRYLRQQHDQMFDALSADYTRRTLELQAQRPV
LAPAAFEQQLRRLQEQQDLDIERLVAGLTQSYLRAAERAEG
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcaacgcgacgggccatgaccgattcatcggtgcccgattacctgagtggctc
aaacgcgcgtcaaggggccagatcaacaccctgcgcaccagtctgaacgcgcaccatgcc
agccaggcacgcttgagtggcctgacgcttgagttactgccgctccagcagtttgccgag
aagcacctggcggcgttgctggatgcaccgttgccggacgggcaggtatttgcccagctc
gagtggctgcgggtggcgccacgcttcggcacactgccaggtaccttgcaacagacatac
gggtacagccagacgcgtgagaacgggttactgcggcttatgcgcaactttgctgcgaat
acccgctactacgagggcacggggctggttttgtcaggcagcgataaaccattgaatgca
tcgctggaagcattgattacggcctgtcgcaatctggacgttggtcagcgttatcaggac
gcgttgcaaaggatcttcccgccagctacccaggcggtgctggctgaagacaaacgttcg
gggttgaagctggcgaccgagcttgcggcattgcagggaaacataagcgtcgatgtgcag
ctcgccttgcgtgaggtggtggaccccgctcaggaggggcgacaaaaaggcctcgaaggc
aaacccatgctgttgagggcaatagggagacctgtggtcgatggcttgctgattcacttg
caagacaaggcgggaaatgaacggggcatcgtgctttacctgcctggtgatccccggcag
gcattgcggttcttcgacaatgtcgcctccatgaacagtaccgtggcaatgttgttgcaa
gatccgggttactggcagttcttcacacagctcatcagccttgagcaccgtgcaggtttt
gtcagtaccctcggcaagcgcctgaaagacaagctgccggacctggagcttgagggtgaa
acacctgggggaggggttttcacgcaactggcgactcggcaagtgcaacgggtcaaggaa
gatgcccggttgctgctggtaccgaccgctgacgctgatagccgggcggttagcgccaga
cacgctgagtggaaggcggcaggtctggacctggtaaacctcgccggccttttcatcccg
gctgtggggggcgtgctgctggggcaggtggttgctcagacgtgcgctgaagtgttcgaa
gggatgagggattggtcgaaggggcaccaacacgaagcgctgcagcatctgctgggggtc
gccgaaaccttggcggctaccgcagcgacggtggcgggtgtcagttttgtgcgcagtgcg
tttgtcgcgggcctggagccggtaagccttgggaatgggcgcagtcgcctgtggcagttc
aacgccagaaattatcgatcattgccgggccctgtcgatctgctcgaggaggagcgcggt
ggcgaggcgggccgccgctgggtccgtatcgatggacgttacctcgaagtgcatcagccc
gtcgtcgatggcccctatcgcctgcgccatgcagcgagtgagggtggctacgggccggtc
gtgttgcacaacggtgagcgtggctggcagctgatgcgtgaacaacccttaagctggcag
gcgcctgcccgcatgctggatgcattatggccacagctttcccctgtggacgcgcatcag
gccgagcagataatgcgggtggcaggtatcgatgcagacttgttgcgcggcgttctcgtg
gagaatcgcccggcgccggtgagccttggccaaaccttgcgcgccttccaggcgcatgca
cgcattgaaaggtttttccagcgtgttcggctgaaggcgttgatgccatcggacagggag
ctgctggcctggtgtgaagcaaggccaggcgtgggcgccggactggagcagatgcaggtg
catgaggctgggttgcggccgcaattgtttgctcgcctgacagaacagtcactggcagca
gacccgctgagcatgttggtaaaacgggacttcccgggtttgccttcggcctacataaat
gaagtaaccggtcaggcgcatgagcttgagcaccaaatggcgcgtgtcgagcggcggctg
ccattgccgtgcgcgaagagcgcccgttcgctcttgcgtctggctcgcctgagccggggg
ctggcggggttgtatctgagcacggcgtacagtgatgtcaccggcgaactggcccttgcg
ttgctggatagcttcgaactcgagcaacttgacctcgacttgcgcgaccgcgggctggat
gggcggtctatcaggcgcctcggtagcggcgggcgaaccgaggcaagaagaatagtggtc
aggcatgaaggcaggtttctgatctacaacgggtcaggtttgccacacgtgtttatcgct
gacgagccgggatgtatcttcgaggcgctttctgccgcactgacatcagagcagcgggca
gcgatgcaactggtgggcagtgcggcggcgaggcaactgcgtgagaagcttctggcgcgg
ttacccgctacccattgggatatcgcgcgcatgctcggctggccagaggagcaggcctgg
ctcaatccagggcgtcgcatggacgatgggcgcgtgggatacccgctcagtggccgccct
ggcgctgctcccagggatgagcgagcgatcattcgcgatcagctacgatcgctttatcct
ggcctggacgaggccgcgctcgatgtggagctggcgcgcgtgcaacaaggcccgcagcca
gtcttcgagcgcctggtagaactgcaggaagcgcatgaccagctagtgctgtacctcaac
cgctgggtcggtgccgagttgcaggaggggcgacgcgccgcccgcaggttgacggccgac
agcatcctgcgagcctggcgactgcagggcgagcctgtttcggccggcgaggggcaaaca
caggggcagcgcttgtcgatgagcggtttgagtttgcgcacactgccagcactaccgccg
catatcgatttccatcgcattaccctgctgagcgtgaacgacaccctgattactgacatt
ccggccgacttccttcgcccgttcactgccttgacgcacctgaacctcaacaacaacgcg
ttgatgcgtctaccaacaggcattgcccatttaccgaatcttcaatcgcttcggttggcg
cataacgagatacgcctcgacgcccaggcgatcagcgttctgcatggtttgtccaacctt
gtgcatcttgatctcagtcataaccggctggaagcgctggacatgagcttccaccaactt
tctcggctgaccagcctgaacctgcgtcattgtcggctgggcagctggccgcgtcgcctg
gagctctgtggtctacttgaacgtgctgacttgcgcaacaaccaactccgcgaagtgccc
accgagatccagctgatgccttatgcatttcgacaggccattctgatggaggacaacccc
ttgtcggtcatgcagcaacgaaggttgtatgccctcgatgtgatcgaagaacaccggcac
tcacctgagcagttggggtcagttgacctggccagggcccgtacgcgttgggtaggccat
acggatgcgacggttcaggccgagcgtgaggccgtgtggctgcggttgctggagcaagcg
ggtagcagcgggttgttcaggttgttggctcgcctggagatgactgcggactacagccaa
gcgggtgaagggcgggatgcgctggttgacggcgtatggacactgctggctacgctggac
ggcgacccggtgctgtgccggcggatttttgagcgggccggcctgccgctgtcatgttcg
gacgccgttgccagccatttcagtgcattgcaggtattggtgaggcaggcgcaggccgaa
gccgccgcagtcaaccctgaacgcaggggcgagttgcttgaactgggcaggcaactgttc
cggctggatcaactggaagggattgcctaccaggatggccggcagcgtctggctgccagt
gaacatgtcgaccagttggcattggggctggcttacagggtgcaacttcgtagccgtttg
cggttgcccaaccagccgtatgccatgcgctatcccgatgctgtcgcgctgacacaggcc
caggtagaggatgcatttctgcgggttacgcgcgcgcagaccatcgagggcctgaccgat
agcctgagccagcgcgcgttctggcgccgttacctgcgccagcaacatgaccaaatgttc
gatgccctcagtgcggattacactcggcgcacgcttgagctgcaggctcaacgtcctgtc
ttggcgccggcggccttcgagcagcaactacgccggctacaggaacagcaggacctcgat
atcgagcgcctggtcgcagggctcacccagtcctacctgcgtgcagccgagcgcgcagag
gggtga
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