Pseudomonas alloputida: LU682_020615
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Entry
LU682_020615 CDS
T09345
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pald
Pseudomonas alloputida
Pathway
pald00300
Lysine biosynthesis
pald00470
D-Amino acid metabolism
pald01100
Metabolic pathways
pald01110
Biosynthesis of secondary metabolites
pald01120
Microbial metabolism in diverse environments
pald01230
Biosynthesis of amino acids
Module
pald_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
pald_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pald00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LU682_020615 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LU682_020615 (lysA)
Enzymes [BR:
pald01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LU682_020615 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Thiolase_C
Motif
Other DBs
NCBI-ProteinID:
WJR15564
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Position
4452220..4453452
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AA seq
410 aa
AA seq
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MTAPFTLLAEAVRQHGSPLWAYDTRTIADRVEQLNVFDTVRFAQKANPNLHVLRLMRAHG
LVLDAVSLGEMERAFAAGASVDGDPAGVVLTCDALDRPTLERVVASKIEVNAGSIDMLHQ
LGERSPGHRVWIRINPGFGHGHSRKTNTGGENSKHGIWHEELDEALACIKAHGLHLVGVH
MHIGSGVDYQHLEQVARSMIELIGRLGVDIEAFSIGGGLSTPYRSTDKPVDLQRYAQTWA
VARKEIEAMLGHPVRMEIEPGRFLVAESGYLVAEVRAVKQVGRNTFVIIDAGFNDLMRPA
MYGAYHGMTLLDADGQAVDRPRQPTVVAGPLCESGDVFTQDDQALTPQDLPQAQVGDLLV
IHDAGAYGASMSSNYNSRPLLPEFLIENGALRMIRRRQTVQDLLSLEADF
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcacccttcaccctcttggccgaggcggttcgccagcacggctcgccactatgg
gcatacgacacccgcaccatcgccgatcgtgtcgagcagctgaacgtgttcgacaccgta
cgtttcgcccagaaagccaacccgaacttgcatgtgctgcgcctgatgcgcgcccatggc
ctggtgctggacgccgtgtcgctgggtgagatggaacgggccttcgccgccggcgcgagc
gttgacggtgaccctgccggcgtggtgctgacctgcgacgcgctggaccgccccaccctg
gaacgcgtggtggcgtcgaagatcgaagtcaacgccggctccatcgacatgctgcaccaa
ctgggtgagcgctcgcccggccaccgcgtgtggatccgcatcaacccgggcttcggccat
ggccacagccgcaagaccaataccggcggcgaaaacagcaagcatggcatctggcacgaa
gagctggacgaggcgctggcgtgcatcaaggcccatggcctgcacctggtgggcgtgcac
atgcacattggctccggggtggactaccagcacctggaacaggtggcccgctcgatgatc
gagctgatcggccgcctgggcgtggacatcgaggcgttctccatcggcggcggcctttcc
accccttaccgcagcaccgacaaaccggtcgacctgcagcgttatgcgcagacctgggcg
gtggcgcgcaaggagatcgaagcgatgctcggccacccggtgcgcatggagatcgaaccc
gggcgcttcctggtggcggagtcgggctatctggtggccgaagtccgtgccgtgaaacag
gtggggcgcaataccttcgtcattatcgacgccggcttcaacgacctgatgcgcccggcg
atgtacggcgcctaccacggcatgaccctgctcgatgccgatggccaggcagtagatcgc
ccgcgccagccgaccgtggtggccgggccgttgtgtgaatcgggtgacgtgttcacccag
gatgaccaggcactgaccccgcaggacctgccccaggcacaggtgggcgacctgctggtg
atccacgatgccggggcctatggcgcgtcgatgtcgtcgaactacaacagccggccgctg
ctgccggagttcctgatcgagaacggtgccctgcggatgatccgccggcggcagacggtg
caggacctgctgagcctggaggcggatttctaa
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