Pseudomonas alloputida: LU682_020885
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Entry
LU682_020885 CDS
T09345
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pald
Pseudomonas alloputida
Brite
KEGG Orthology (KO) [BR:
pald00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pald03400
]
LU682_020885
DNA repair and recombination proteins [BR:
pald03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LU682_020885
Archaeal homologous recombinant proteins
LU682_020885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
WJR15615
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All DBs
Position
4516653..4517891
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AA seq
412 aa
AA seq
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MRLFHTSDWHLGQSLHGQERDFEHACFLDWLLGQLRLRQPDALLIAGDIFDTVNPPVKAQ
ERLYDFIVQAHEQQPKLDIVMIAGNHDSGSRIELPAALMRRLRTHALGRVHWLDEGQLDA
ERLLIPLTNGRGKVAAWCLALPFLRPAEVTGPQLGDDYLQGITQVHQQLIAAALKKRKKD
QALIAISHAHMAGGAVSEDSERSLIIGNAEALPAKLFDKAISYVALGHLHKPQKVNREER
IRYSGSPIPLSFAEINYPHQVLEVELDGNGLVSVEPRPVPRAVALQRVGPAPLGELLQQL
ADLPVVDLLEDPNRQPWLEVRVLLDEPQPDLRQQIETALEGKAVRLIRISAEYAGRNNAE
DDDLAFVELAQMTPQDLFSRAWEQAYGNPADDQALADFALLLQDVQQEEEQP
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtttcatacctccgactggcacctgggccaaagcctgcacggccaggaacgc
gacttcgaacacgcctgcttcctcgactggctgctcggccaactgcgcctgcgccagccg
gatgcgctgctgattgcgggcgacatcttcgacaccgtcaacccgcccgtcaaagcccag
gaacgcctctacgacttcatcgtccaggcccacgagcaacagcccaagctggacatcgtg
atgattgccggcaaccacgactccggttcgcgcatcgagctgccggccgcactcatgcgc
cgcctgcgcacccatgcgttgggccgtgtgcactggctggacgagggccagctggatgcc
gaacgcctgttgattccgctgaccaacggccgtggcaaggtggccgcctggtgcctggcc
ctgccgttcctgcgcccggccgaagtgaccggcccgcagctgggtgacgactacctgcaa
ggcatcacccaggtgcatcagcaactgatcgccgccgccctgaagaaacgcaagaaagac
caggcgctgatcgccatcagccacgcgcacatggccggtggcgcggtatcggaagactcc
gaacgcagcctgatcatcggcaacgccgaggcgctgccggccaagctgttcgacaaggct
atcagctacgtcgccctgggccatctgcacaagccgcagaaggtcaaccgcgaagagcgc
atccgctacagcggctcgccaatcccgctgtcgttcgccgaaatcaactacccgcaccag
gtcctggaagtggagttggacggtaacggcctggtcagcgtcgagccacgccccgtacca
cgcgccgtggccctgcaacgggtgggcccggcaccgctgggcgagctgttgcagcaactg
gccgacctgcccgtggtcgacctgcttgaagaccccaaccgccagccctggctggaggtg
cgggtgttgctcgacgagccgcaacccgacctgcgccagcagatcgaaaccgcgcttgaa
ggcaaggcggtacggctgattcgtatcagcgccgagtacgccggccgcaacaacgccgaa
gacgatgacctggcctttgtcgaactggcccagatgaccccgcaagacctgttcagccgc
gcctgggaacaagcctacggcaaccccgccgacgatcaggcgctggccgacttcgccctg
ctgttgcaggacgtgcagcaggaagaggaacagccatga
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