Pseudomonas alloputida: LU682_023265
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Entry
LU682_023265 CDS
T09345
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pald
Pseudomonas alloputida
Pathway
pald00300
Lysine biosynthesis
pald01100
Metabolic pathways
pald01120
Microbial metabolism in diverse environments
pald01230
Biosynthesis of amino acids
Module
pald_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pald00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LU682_023265 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pald01002
]
LU682_023265 (dapE)
Enzymes [BR:
pald01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
LU682_023265 (dapE)
Peptidases and inhibitors [BR:
pald01002
]
Metallo peptidases
Family M20
LU682_023265 (dapE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Glyco_transf_20
BNR_2
Motif
Other DBs
NCBI-ProteinID:
WJR16048
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Position
5016049..5017200
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AA seq
383 aa
AA seq
DB search
MTAPAELSPTLQLACDLIRRPSVTPVDADCQAQMMNRLGAVGFQLEPMRIEDVDNFWATH
GSQDGPVLCFAGHTDVVPTGPVQQWQHEPFEALIDADGMLCGRGAADMKGSLASMVIASE
RFVQDYPNHRGKVAFLITSDEEGPAHHGTKAVVERLKARNERLDWCIVGEPSSTTLLGDV
VKNGRRGSLGAKLTIRGKQGHVAYPHLARNPIHLAAPALAELAAEHWDEGNAFFPPTSFQ
ISNLNSGTGATNVVPGELTALFNFRFSTESTVEGLQARVSAILDKHELDWSVDWALSGLP
FLTEPGELLDAVAASIKGVTGRDTQPSTSGGTSDGRFIATMGTQVVELGPVNATIHQVDE
RILASDLDLLTEIYYQTLVRLLA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacggcccctgccgagctctcgcctacccttcaactggcctgcgacctgatccgtcgc
ccctcggtcacccccgtcgacgccgattgccaggcgcagatgatgaaccgtctgggcgcc
gtcggtttccagctggagccgatgcgcattgaagacgtcgacaacttctgggccacccac
ggcagccaggacggcccggtactgtgttttgccggccacaccgacgtggtgcctaccggc
ccggtccagcaatggcagcatgaacccttcgaggcactgatcgacgccgacggcatgctc
tgcggccgtggcgccgccgacatgaagggcagcctggcatccatggtcatcgccagcgag
cgcttcgtgcaggactacccgaaccaccgcggcaaggtcgcgtttctgatcaccagcgac
gaggaaggccccgcccaccacggcaccaaagcggtggtcgagcgcctgaaagcgcgcaac
gagcgcctggactggtgcatcgtcggcgaaccgtccagcaccaccttgctgggtgacgtg
gtcaagaacggtcgccgcggttcgctgggcgccaagctgaccatacgcggcaaacagggc
catgtggcctacccgcacctggcgcgcaacccgatccatctggccgccccggccctggcg
gaactggctgccgagcactgggacgaaggcaatgcgttcttcccgccaaccagcttccag
atctccaacctcaactccggcaccggcgccaccaacgtggtcccgggcgagctgaccgcg
ctgttcaacttccgcttctctaccgagtccaccgtcgaaggcctgcaggcccgagtgtcg
gcgattctcgacaagcatgaactggactggtcggtcgactgggcactgtcgggcctgccg
ttcctgaccgaaccaggcgagctgctcgacgccgtggcggccagcatcaagggcgtcacc
ggtcgcgatacccagccctccaccagcggcggcacttccgatggccgcttcatcgcaacc
atgggcactcaggtggtcgaactcggcccggtcaacgccaccatccaccaggttgacgag
cggatcctggccagcgacctcgatctgctgaccgaaatctactaccagaccctggtccgg
ttgctcgcctga
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