Pseudomonas alloputida: LU682_023405
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Entry
LU682_023405 CDS
T09345
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
pald
Pseudomonas alloputida
Pathway
pald00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pald00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LU682_023405 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pald01007
]
LU682_023405 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pald03016
]
LU682_023405 (lysS)
Enzymes [BR:
pald01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
LU682_023405 (lysS)
Amino acid related enzymes [BR:
pald01007
]
Aminoacyl-tRNA synthetase
Class II (A)
LU682_023405 (lysS)
Transfer RNA biogenesis [BR:
pald03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LU682_023405 (lysS)
Prokaryotic type
Other AARSs
LU682_023405 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
WJR16076
LinkDB
All DBs
Position
complement(5043985..5045487)
Genome browser
AA seq
500 aa
AA seq
DB search
MSDLKTESQDLQQEENALIALRKEKLAAERAKGNAFPNDFRRDSYCNDLQKQYADKTKEE
LEAAAIPVKVAGRIMLNRGSFMVIQDMTGRIQVYVNRKTLPEETLAAVKTWDLGDIISAE
GTLARSGKGDLYVEMTNVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLMVNEETRHTFR
VRSQVISHIRKFLIERDFLEVETPMLQTIPGGAAAKPFETHHNALDMAMFLRIAPELYLK
RLVVGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYRDNMDLTEELFRELAQLV
LGSTDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTAADLQDVDRAREIARKAGAKVLGH
EGLGKLQVMIFEELVEHKLEQPHFITEYPFEVSPLARRNDDNPAVTDRFELFIGGREIAN
AYSELNDAEDQAERFLAQVAEKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVML
LTNSPSIRDVILFPHMRPQA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacctcaagaccgaatcgcaagacctgcaacaggaagaaaacgccctgatcgcc
ctgcgcaaggaaaaacttgccgccgagcgtgccaagggcaatgccttccccaacgacttc
cgtcgcgacagctactgcaacgacctgcagaagcaatacgcggacaagaccaaggaagag
ctggaagcagccgcgatcccggtcaaggtcgccggccgcatcatgctcaaccgtggttcg
ttcatggttatccaggacatgactggccgtattcaggtctacgtcaaccgcaagaccctg
ccggaagaaaccctggccgcggtcaagacctgggacctgggcgacatcatcagcgccgaa
ggcaccctggcccgttccggcaagggcgacctgtacgtcgaaatgaccaacgtgcgcctg
ctgaccaagtcgctgcgcccgctgcccgacaagcaccacggcctgaccgacaccgagcag
cgctaccgccagcgctacgtcgacctgatggtcaacgaagaaacccgccacaccttccgt
gtgcgttcgcaggtgatctcgcacatccgcaagttcctcatcgagcgtgacttcctcgaa
gtcgagacgccgatgctgcagaccatcccgggcggcgccgctgccaagccgttcgaaacc
caccacaatgccctggacatggccatgttcctgcgtatcgcgccggagctgtacctcaag
cgtctggtggttggtggttttgagaaagtgttcgagatcaaccgtaacttccgtaacgaa
ggcgtttcgactcgtcacaaccctgaattcaccatgctcgagttctaccaggcctacgcc
gactaccgcgacaacatggacctcaccgaggaactgttccgcgagctggcgcaactggta
ctgggctccactgacgtaccgtacggcgacaaggtcttccacttcggcgagccgttcgtg
cgcctgtcggtgttcgactcgatcctcaagtacaacccggagctgaccgccgccgacctg
caggacgtcgaccgcgcccgcgagattgccaggaaggccggcgccaaggtgctgggccat
gaaggcctgggcaagctgcaggtgatgattttcgaagagctggtcgagcacaagctggaa
cagccgcacttcattaccgagtacccgttcgaagtgtcgccgttggcccgtcgcaacgac
gacaacccggccgttaccgaccgtttcgagctgttcatcggtggccgcgaaatcgccaac
gcctactccgagctcaacgatgccgaagatcaggccgagcgcttcctggcccaggtggcc
gagaaggacgcgggtgacgatgaagccatgcactatgacgccgacttcgttcgtgcgctg
gagtacggcatgccgccgaccgccggtgaaggcatcggcatcgaccgcctggtgatgctg
ctgaccaactcgccgtcgatccgcgacgtcatcctgttcccgcacatgcgtccgcaggcc
tga
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