Pseudomonas alloputida: LU682_024180
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Entry
LU682_024180 CDS
T09345
Symbol
istA
Name
(GenBank) IS21-like element IS1326 family transposase
Organism
pald
Pseudomonas alloputida
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Mu-transpos_C_2
HTH_IclR
HTH_24
HTH_23
HTH_7
Sigma70_r4_2
HTH_38
TnsD
HTH_29
Phage_NinH
HTH_28
HTH_31
MerR
HTH_40
HTH_36
HTH_30
HTH_AsnC-type
HTH_Tnp_1
TetR_N
HTH_3
HTH_Tnp_Tc3_1
Sigma70_r4
MerR_1
HTH_11
LacI
Motif
Other DBs
NCBI-ProteinID:
WJR16225
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Position
complement(5202745..5204268)
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AA seq
507 aa
AA seq
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MINVAILSAIRRWHFRDGASIREIARRSGLSRNTVRKYLQSKVVEPQYPARDSVGKLSSF
EPKLRQWLSTEHKKTKKLRRNLRSMYRDLVALGFTGSYDRVCAFARQWKDSEQFKAQTSG
KGCFIPLRFACGEAFQFDWSEDFARIAGKQVKLQIAQFKLAHSRAFVLRAYYQQKHEMLF
DAHWHAFQIFGGIPKRGIYDNMKTAVDSVGRGKERRVNQRFTAMVSHYLLDAQFCNPASG
WEKGQIEKNVQDSRQRLWQGAPDFQSLADLNVWLEHRCKALWSELRHPELDQTVQEAFAD
EQGELMALPNAFDAFVEQTKRVTSTCLVHHEGNRYSVPASYANRAISLRIYADKLVMAAE
GQHIAEHPRLFGSGHARRGHTQYDWHHYLSVLQKKPGALRNGAPFAELPPAFKKLQSILL
QRPGGDRDMVEILALVLHHDEGAVLSAVELALECGKPSKEHVLNLLGRLTEEPPPKPIPI
PKGLRLTLEPQANVNRYDSLRRAHDAA
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
gtgataaacgtggcgatattgagcgcaattcgacgctggcattttcgcgatggtgcgtcg
attcgggaaatagcccgacgaagcggcctgtccaggaacaccgttcgcaagtatttgcaa
agcaaggtggttgaaccgcagtacccagcgcgagacagcgttggcaagttaagttctttt
gagcccaagttaaggcagtggctctccaccgagcacaaaaagacaaagaagctgcgcaga
aacctgcgcagcatgtaccgggatttggtcgctttgggctttaccgggtcttatgaccga
gtgtgtgcctttgcccgacagtggaaagattccgaacagttcaaggcgcaaacctcgggc
aagggttgtttcatccccttgcgctttgcttgtggcgaagccttccaattcgattggagt
gaggactttgcccgcatagcgggcaaacaggtcaaacttcagattgcccagtttaagttg
gcccacagccgggcctttgtgcttcgggcttactaccagcaaaaacatgaaatgctgttt
gatgcccactggcatgcctttcaaatcttcggtggcattcccaagcgcggcatctacgac
aacatgaagaccgctgtggattcggtggggcgtggcaaagagcgcagggtcaatcagcgg
ttcactgccatggtcagccactacctgttagatgcgcagttctgtaatccagcatcgggt
tgggagaaaggccagattgagaagaacgtgcaggattcccgccaacgcctgtggcaaggg
gcaccagactttcaaagccttgctgatttgaatgtgtggcttgagcatcgctgcaaagcg
ctgtggtctgagctgcgccaccccgaattggaccaaaccgtgcaagaggcctttgccgat
gaacaaggcgagttgatggcgctacccaatgcctttgatgcattcgtggagcaaaccaag
cgagtcacttcaacctgccttgttcaccacgagggcaatcgctacagcgttcctgccagt
tacgccaacagggccatcagccttcggatttatgcagacaagctggtgatggctgccgaa
ggccaacacattgccgagcatccaagattgtttggcagtggccacgctcggcgtggccac
acacaatacgactggcaccattacttgtctgtgcttcagaagaaacctggggcgttgcgc
aatggtgcgccatttgctgaattgccacccgcgttcaagaagcttcaatccatcttgctg
caacgccccggcggtgaccgtgacatggtggaaattctggcccttgtattgcaccacgat
gaaggtgcggtactcagtgctgtggaattggcattggagtgtggcaagccatcgaaggag
catgtgcttaatctgttgggacgtttgaccgaagaacctccacccaaaccgattccaatt
cccaaggggttaaggctgacattggaaccacaggccaacgtgaaccgctatgacagttta
aggagagcccatgatgcagcatga
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