KEGG   Pseudomonas alloputida: LU682_024375
Entry
LU682_024375      CDS       T09345                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
pald  Pseudomonas alloputida
Pathway
pald02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pald00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LU682_024375
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pald02022]
    LU682_024375
Two-component system [BR:pald02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   LU682_024375
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 AAA_5 FleQ MCM AAA_2 AAA_16 AAA_3
Other DBs
NCBI-ProteinID: WJR16256
LinkDB
Position
5244398..5245732
AA seq 444 aa
MLNSVIVVDDEASIRTAVEQWLSLSGFSVELFARAEACLAHLPQHFPGVIISDVRMPGMD
GLQLLERLQANDPDLPVILLTGHGDVPMAVEAMRSGAYDFLEKPFTPQDLLGSLRRALEK
RQLVLENRRLHEQADLKSRLEGTLLGMSQGLQQLRRQVLDLAGLPVNVLIRGETGSGKER
VARCLHDFGPRAAKPFVALNCAAIPESLFEAELFGHESGAFTGAQGKRIGKLEYANGGTV
FLDEIESMPLAQQAKLLRVIQEQKLERLGANQSISVDLRIIAATKPDLLEEARAGRFRED
LAYRLNVAELRLAPLRERREDIPLLFEHFARAAGEKLGRAAPPLSGAQLAQLLSHDWPGN
VRELANAAERHALGLGSPNIEVAPAGQSLGEQMEAFEAQCLRAALRQHGGEIKSVMEALQ
LPRRTLNEKMQRHGLVREDFIGQA
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgttgaattcggtgatcgtcgtcgatgatgaagctagtatccgcactgctgtcgagcaa
tggctgagcctgtctggcttcagcgtggagttgttcgctcgcgccgaagcgtgcctggca
cacctgccgcagcacttccctggggtgatcatcagcgatgtgcgcatgccgggcatggat
ggcctgcaattgctcgaacgcctgcaggcgaacgaccccgacctgcccgtaattctgctg
accggtcacggtgatgtaccgatggcggtagaagccatgcgcagcggggcctatgacttc
ctggaaaaacccttcacgccgcaagacttgctgggcagcctgcgccgcgcccttgaaaaa
cgccagctggtgcttgagaaccgccggctccacgagcaggccgacctcaagtcacgcctg
gaaggcacgctgctgggcatgtcccagggcctgcaacagctgcgccggcaagtgctggac
ctggccggcctgccggtgaacgtgttgatccgcggtgaaaccggcagtggcaaggagcgg
gtggcccgctgcctgcacgacttcggcccccgtgccgccaagccctttgtagcccttaac
tgcgcggccatccccgagtcgctgttcgaggccgaactgttcggccatgagagcggcgcc
ttcacgggcgcccagggtaaacgcatcggcaagctggagtatgccaacggtggcaccgtg
ttcctcgacgaaatcgagagcatgcccctggcccaacaggccaagctgttgcgggtgata
caggagcagaagttggagcgcctgggggcaaaccagagcatcagcgtcgacctgcgcatc
attgctgcgaccaagcctgacctgctcgaggaggctcgtgccgggcgcttccgcgaagac
ctggcctaccgcctgaacgtcgccgaattgcgcctggcaccgctgcgcgagcggcgggag
gacattccgctgctgttcgaacactttgcccgtgctgccggtgaaaagcttggtcgcgcg
gccccgccgctatcgggtgcacagctggcgcagctgctgtcacatgactggcctggcaac
gtgcgtgaactggccaatgcggcggagcggcatgcgttggggctgggttcgccaaatatc
gaggtggcacctgccgggcagtcgctgggcgagcagatggaagcattcgaggcgcaatgc
ctgcgtgcggccttgcgtcagcatgggggcgagatcaagtcggtgatggaggccttgcaa
ctgcctcggcgcacgcttaacgagaagatgcaacggcatgggctggtgcgcgaggatttt
attgggcaggcatga

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