Pseudomonas alloputida: LU682_024580
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Entry
LU682_024580 CDS
T09345
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pald
Pseudomonas alloputida
Pathway
pald03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pald00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LU682_024580 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pald03019
]
LU682_024580 (groL)
03110 Chaperones and folding catalysts [BR:
pald03110
]
LU682_024580 (groL)
03029 Mitochondrial biogenesis [BR:
pald03029
]
LU682_024580 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pald04147
]
LU682_024580 (groL)
Enzymes [BR:
pald01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LU682_024580 (groL)
Messenger RNA biogenesis [BR:
pald03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LU682_024580 (groL)
Chaperones and folding catalysts [BR:
pald03110
]
Heat shock proteins
HSP60 / Chaperonin
LU682_024580 (groL)
Mitochondrial biogenesis [BR:
pald03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LU682_024580 (groL)
Exosome [BR:
pald04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LU682_024580 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LU682_024580 (groL)
Exosomal proteins of breast cancer cells
LU682_024580 (groL)
Exosomal proteins of colorectal cancer cells
LU682_024580 (groL)
Exosomal proteins of bladder cancer cells
LU682_024580 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5891
Motif
Other DBs
NCBI-ProteinID:
WJR16294
LinkDB
All DBs
Position
complement(5290167..5291807)
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKDVKFGDSARKKMLVGVNVLADAVKATLGPKGRNVVLAKSFGAPTITKDGVSVAKEI
ELKDAFENMGAQLVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKATAAVVAELKNLSKPCADSKAIAQVGTISANSDNSIGEIIAEAMEKVGKEGVITVEEG
SGLENELSVVEGMQFDRGYLSPYFVNKPDTMVAELEGPLLLLVDKKISNIRELLPVLEAV
AKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGQV
ISEEIGLSLETATLEHLGNAKRVILSKENTTIIDGAGADTEIEARVKQIRAQIEETSSDY
DREKLQERLAKLAGGVAVIKVGAGTEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RALAAIIDLKGDNEDQNVGIALLRRAVESPLRQITANAGDEPSVVADKVKQGSGNFGYNA
ATGEYGDMIEMGILDPAKVTRSALQAAASIGGLMITTEAMVADLPEDKPAAGMPDMGGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacgtaaaatttggtgattccgctcgtaagaaaatgctggttggtgtc
aacgttctggctgacgcggtaaaagcgaccctgggcccgaaaggccgtaacgtggtactg
gccaagagcttcggcgcgccgaccatcaccaaggacggcgtttccgtcgccaaagaaatc
gagctgaaagacgctttcgaaaacatgggcgcccagctggtcaaggaagttgcttccaag
gccaacgacgctgccggtgacggcaccaccaccgctaccgttctggctcaggccatcgtc
aacgaaggcctgaaagccgtcgctgccggcatgaacccgatggacctgaagcgcggtatc
gacaaggccactgctgccgtcgttgccgaactgaagaacctgtccaagccatgcgccgac
tccaaggccatcgcccaggtaggtaccatctctgccaactccgacaactccatcggtgaa
atcatcgccgaagccatggaaaaagtcggtaaagaaggcgtgatcaccgttgaagaaggc
tcgggcctggaaaacgaactgtccgtcgtagaaggcatgcagttcgaccgcggctacctg
tcgccgtacttcgtcaacaagccggacaccatggttgccgagctggaaggcccgctgctg
ctgctggtcgacaagaaaatctccaacatccgtgagctgctgccagttctggaagccgtt
gccaaggccggccgcccactgctgatcgttgccgaagacgttgaaggtgaagcgctggct
accctggtagtcaacaacatgcgcggcatcgtcaaggttgctgcagtcaaggctccgggc
ttcggcgatcgccgcaaggccatgctgcaggacatcgctgtcctgactggcggccaggtc
atctccgaagaaatcggcctgtccctggaaaccgctaccctggagcacctgggtaacgcc
aagcgcgtcatcctgtccaaggaaaacaccaccatcatcgacggtgctggcgctgacacc
gagatcgaagcacgcgtcaagcagatccgtgcccagatcgaagaaacttcctcggactac
gaccgtgagaagctgcaagagcgtctggccaagctggctggcggtgttgccgtgatcaag
gtcggtgccggcaccgaagttgaaatgaaagagaagaaagcccgcgttgaagacgccctg
cacgctacccgtgcagccgttgaagaaggcgtggtgcctggcggtggtgttgccctggtt
cgcgccctggcagccatcatcgacctgaaaggcgacaacgaagaccagaacgtcggtatc
gcgctgctgcgtcgcgctgttgaatccccgctgcgccagatcactgccaacgccggtgat
gagccaagcgtggttgctgacaaggtcaagcaaggttcgggcaacttcggctacaacgcc
gctaccggtgaatacggcgacatgatcgagatgggtatcctggacccagccaaggtcact
cgctcggcgctgcaagctgctgcttcgatcggcggtctgatgatcaccaccgaagccatg
gttgccgacctgccggaagacaagccagctgctggcatgcctgatatgggtggcatgggt
ggcatgggcggcatgatgtaa
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