KEGG   Pseudomonas alloputida: LU682_025365
Entry
LU682_025365      CDS       T09345                                 
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
  KO
K00557  tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
Organism
pald  Pseudomonas alloputida
Brite
KEGG Orthology (KO) [BR:pald00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pald03016]
    LU682_025365 (trmA)
Enzymes [BR:pald01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.35  tRNA (uracil54-C5)-methyltransferase
     LU682_025365 (trmA)
Transfer RNA biogenesis [BR:pald03016]
 Prokaryotic type
  tRNA modification factors
   Methyltransferases
    LU682_025365 (trmA)
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_25 Methyltransf_31 Methyltransf_4 Methyltransf_11 Cons_hypoth95 Methyltransf_12 MTS RrnaAD DREV pP_pnuc_1 Methyltransf_15 TRM5-TYW2_MTfase PrmA Ubie_methyltran Trp_halogenase
Other DBs
NCBI-ProteinID: WJR16441
LinkDB
Position
5458399..5459484
AA seq 361 aa
MSAAFDPSSYATQLDAKVARLRELLAPFGAPEPAVFDSPREHYRLRAEFRLWREDGQRHY
AMFAPGEKHKAILIDDFPIASERINALMPRLKAAWQASEELGNRLFQVEFLTTLAGDAMI
TMCYHRPLDEAWEVEARQLAEALGVSVIGRSKGKRLVIGRDYAVEKLDVAGRVFSYRQPE
GAFTQPNGAVNQKMLSWAFEAIGEREDDLLELYCGNGNFTLPLATRVRQVLATEISKTSV
NAALSNLDENAVDNVRLVRLSAEELTQALNEVRPFRRLEGIDLKSYQFGTVFVDPPRAGM
DPDTCELTRRFERILYISCNPETLAANIAQLQDTHRIERCALFDQFPYTHHMESGVLLVR
R
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgagtgctgctttcgacccctcctcctacgccacccagctggatgccaaagtggcccgg
ctgcgcgagctgctggcaccgttcggcgcgccggaaccggctgttttcgactcaccgcgc
gagcattaccgcctgcgcgccgagttccgcctgtggcgcgaggatggccagcgccactac
gccatgttcgccccgggcgagaagcacaaggcaatcctgatcgacgatttccccattgcc
agcgaacgcatcaacgcgttgatgccgcgcctgaaggcagcctggcaggccagcgaagaa
ctgggcaaccgcctgttccaggtggagttcctcaccaccctggctggcgatgcgatgatc
acgatgtgctatcaccgcccgctggacgaggcctgggaagtggaagcacggcaactggct
gaagcgctgggggtgagcgtcatcggccgctccaagggcaagcgcctggttatcggccgc
gactacgcggtggaaaagcttgatgtggctggccgcgtgttcagttaccgccagccggag
ggtgcgttcacccagcccaacggcgcagtgaaccagaagatgctcagctgggccttcgag
gccattggcgagcgtgaggatgacctgctggagctgtattgcggcaacggcaacttcacc
ctgccgctggccacgcgtgtacgccaggtgctggccaccgaaatcagcaagacgtcggtc
aatgccgccctgagcaaccttgacgaaaacgctgtggataacgtgcggctggtacgtttg
tcggcagaggagctgacccaggcactgaatgaggtgcggccgttccgtcgcctggaaggc
atcgacctgaagagttatcagttcggtaccgtgttcgtcgacccaccgcgtgcggggatg
gacccggatacctgcgagctgacccggcgtttcgagcgcattctgtacatctcgtgcaac
ccggaaacgctggcagcgaacattgcccagttgcaggacacccaccgcatcgagcgctgt
gcattgtttgaccagttcccgtatacccaccatatggagagtggggttctgctggttcgg
cgctga

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