Pseudomonas alloputida: LU682_025465
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Entry
LU682_025465 CDS
T09345
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pald
Pseudomonas alloputida
Pathway
pald03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pald00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LU682_025465 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pald03400
]
LU682_025465 (recC)
Enzymes [BR:
pald01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LU682_025465 (recC)
DNA repair and recombination proteins [BR:
pald03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LU682_025465 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
WJR16461
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All DBs
Position
complement(5482386..5485868)
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AA seq
1160 aa
AA seq
DB search
MLNTAHLHPGFMIVHGNRLDDLRSLVVSWMRRYPLAPLENEIALVQSNGIAQWLKLALAE
DPLEDDQGGCGIAAAIDVQLPGSFMWQLYRSVLGRSEIPEVSLLDKAPLTWRLMRLLPAL
IERPHFEPLRRFLTDDSDLRKRYQLAERLADLFDQYQVYRADWLKDWATGEHVINTARGE
RKVLPPGNRWQAELWRALLEDVGEQGMAQSRAGVHQRFIERINSLEQAPAGLPPRVIVFG
ISSLPAQALEALAGLSRFSQVLLCVHNPCRHHWADIVADKDLLRHQYKRQQRKQGMPLQL
DDQTLHQHAHPLLAAWGKQGRDYINLLDSYDDPGSYQGVFSDGRIDLFSDGSPTTLLNEL
QDDILELRPLAESRERWPAVDTTKDRSIRFHIAHSPQREVEILHDQLLARFSADPTLRPR
DVIVMLPDIDTYAPHIRAVFGQLQRNDPRYIPFTLTDQGQRGREPLLIALEHLLKLPDSR
FAVSEVLDLLDVPAVRARFGIRENDLPTLHRWIEGAGIRWGLDAAQRASLGLPAGLEQNS
WRFGLRRMLLGYAVGVGEACDGIEPYDEIGGLDAALIGPLVALLDALEVACQALSEPATV
SQWGERLHALLHVFFLAEDEGDEFLLMQLQDLRDSWLEVCETVGLHDPLPLTVVREAWLS
GLDQGKLSQRFLAGSVNFCTLMPMRAIPFRVVCLLGMNDGDYPRAQPPLDFDLMASDYRP
GDRSRREDDRYLLLEALLSARDQLYVSWVGRSIRDNSERPASVLIGQLRDHIAAGWHLAD
AQQGQPARPGEQLLHALTQEHPLQPFSPRYFQKGSPLFSYAHEWQVLHQQGETDAQSEPG
LPPYQDAEALSLHQLNDFLRHPVRHFFSQRLKVYFEALEAPTPDEEPFVLDTLQRYGASE
SLLGAALAEPDNAEQALRAQARRLQACGLLPLAGFGELLQNELIEPLPDLLQRHQQLLQR
WPQLVEGALPVHFEHGQHRLEGWLGRVFQAEDQSLLSITTVPNTISAGRNNLKWHRLIAP
WVTHLAACAAGYPYNSALVASDLTLLLAPLPQAQAAQLLGDLLVARQAAMNAPLPVAAKT
AFAWLAQDDADKALAAAARAYEGDERTSFGERSESIALARQFRDFAALTADETFEGWCET
LYRPLFTAPWQTLGNPEKGA
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgctcaacaccgcccatctccaccctggcttcatgatcgtccacggcaaccgcctcgac
gacctgcgtagcctggtagtgagctggatgcgtcgctacccgctggcgcctctggaaaac
gaaattgccctggtgcaaagcaatggcattgcccaatggctcaagctggccctggctgaa
gatccgctggaagatgaccaaggcggctgcggcatcgccgctgcaatcgatgtgcaactg
cccggtagctttatgtggcagctctaccgcagcgtgcttggccgtagcgaaatccccgaa
gtgtctctgctcgacaaggcacccctgacctggcgcctgatgcgcctgttgccagcgctc
atcgagcgcccgcatttcgagccactgcggcgcttcctcaccgatgacagtgacttgcgc
aagcgctaccagctcgccgagcgcttggccgacctgttcgaccagtatcaggtctaccgc
gccgattggctcaaggactgggccactggtgagcacgtcatcaacacggcccgcggcgag
cgcaaagttctgccgccaggcaaccgctggcaagccgagttgtggcgagcattgctggag
gatgttggcgagcaaggcatggcgcaaagccgcgccggggtacaccaacgtttcatcgag
cgcatcaacagcctggagcaggcgcctgcagggctgccaccgagggtgatcgtgttcggt
atctcttcgctgccggcccaggccctggaagcactggcaggcctgtcgcgtttcagtcag
gtattgctgtgcgtacacaacccatgccgccaccactgggccgatatcgttgccgacaag
gacctgttgcgccaccagtacaaacgccagcaacgcaagcaaggcatgcccctgcaactg
gacgaccagacgctgcaccagcatgcccacccgttgctggcagcctggggtaaacaaggc
cgcgactacatcaacctgctcgacagctatgatgacccaggcagctaccagggcgtgttc
agcgacggccgcatcgacctgttcagcgacggttcgcccaccacgctgctcaacgaactg
caggacgacatcctggaattgcgcccgctcgccgagagccgcgaacggtggccggcagtc
gacaccacaaaagaccgctcgatccgcttccatatcgcgcacagcccgcaacgtgaagtg
gagatcctccacgaccagctgttggcccgcttcagcgccgacccgactttgcgcccgcgc
gacgtgatcgtcatgctgccggacatcgacacttacgcgccgcatatccgcgccgtcttc
ggccagttgcagcgtaacgatccacgctacatcccgttcaccctgacagaccagggccag
cgtggtcgcgagcctttgctgatcgcgcttgagcacctgctcaaactgcctgacagccgc
ttcgcggtcagcgaagtgctcgacctgctggacgtgccggcagtccgcgcccgcttcggc
atccgcgaaaacgacctgcccacgctgcaccgctggatcgagggcgctggcatccgttgg
ggccttgacgccgcgcagcgggcgagcctgggcttgcccgccgggctcgaacagaacagt
tggcgtttcggcctgcgccgcatgctgttgggttatgccgtgggggtgggtgaggcctgt
gatggcattgaaccctacgatgaaatcggtggcctggacgcggcactgatcggcccgctg
gtcgcgttgctggatgcgctcgaagtcgcctgccaggccttgtccgagcctgccaccgtc
agccagtggggcgagcgactgcatgccttgctgcacgtgttcttcctcgccgaggacgag
ggtgatgagttcctgttgatgcagttgcaggatttgcgtgatagctggcttgaggtgtgc
gagaccgtcggcctgcacgacccgctaccgcttaccgtggtgcgtgaagcctggctgtcg
ggcctcgatcagggcaagctgtcacaacgtttcctcgccggctcggtcaacttctgcaca
ctcatgcccatgcgcgcgatccccttcagagtggtctgcctgctgggcatgaacgatggc
gattacccgcgtgcgcagccaccgctggacttcgacctgatggccagcgactatcgcccc
ggcgaccgctcacgccgcgaagacgaccgttacctgttacttgaagcgctactgtcagca
cgtgaccaactgtatgtcagctgggtcgggcgcagtatccgcgacaatagcgaacgcccg
gcctcggtgctgatcggccagttgcgcgatcacatcgctgcgggctggcatttggccgac
gcgcagcagggccagcccgcgagaccgggcgagcaactgttgcacgcactgacccaggag
cacccgctgcagccgttcagccctcggtacttccagaagggcagcccactgttcagctat
gcccatgaatggcaggtgctgcaccagcagggtgagacagacgcgcagagcgagccgggc
ttgccgccttatcaggacgctgaagccctgagtctgcaccagctgaatgacttcttgcgc
cacccggtacggcacttcttcagccagcgcttgaaggtgtactttgaggcgctggaagcg
ccgaccccggacgaagagcccttcgtcctcgataccctgcaacgctacggcgccagtgaa
agcctgcttggcgccgccttggccgaaccggacaacgccgaacaagccttgcgcgcccag
gcccgacgcctgcaggcctgcggtctgctgccgctagccggtttcggcgaactgctgcaa
aacgagttgatcgaaccgctgccggacctgctgcaacgtcaccagcaattgctgcaacgc
tggccacagctggtcgagggcgctttgccggtgcatttcgagcacggtcagcaccgtctg
gagggctggctgggccgggtgttccaggcggaagatcagagccttctcagtatcaccaca
gtacccaacaccatcagtgccgggcgcaacaacctgaagtggcaccgccttatcgcgccc
tgggttacgcacctggcggcctgtgcggcgggctacccctataacagtgcattggtagcc
agtgacctgaccctgttgcttgcacccctgccgcaagcgcaggccgcgcaactgctgggc
gacctgttggtggcccgtcaggcggcaatgaacgcgccgttgccagtcgcggccaagacc
gcgttcgcctggttggcccaggacgatgcggataaagccctggccgcagcagctcgcgcc
tacgaaggcgacgaacgcaccagctttggcgaacggagtgaaagcattgccttggcccgc
cagttccgggactttgcagcactcaccgctgacgaaacgtttgaaggctggtgcgaaacc
ttgtatcgcccgttgtttaccgccccttggcagaccttgggcaacccggagaaaggcgca
tga
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