Pseudomonas alloputida: LU682_025610
Help
Entry
LU682_025610 CDS
T09345
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pald
Pseudomonas alloputida
Pathway
pald03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pald00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LU682_025610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pald03019
]
LU682_025610
Enzymes [BR:
pald01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
LU682_025610
Messenger RNA biogenesis [BR:
pald03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LU682_025610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
BenE
Motif
Other DBs
NCBI-ProteinID:
WJR16483
LinkDB
All DBs
Position
5517390..5518772
Genome browser
AA seq
460 aa
AA seq
DB search
MLKKLFQSFRPPVPGPHHRRTTPEVINKSQHSLQRHQFSRHAVNIVERLQSAGYQAYLVG
GCVRDLMLGITPKDFDVATSATPEQVRAEFRNARIIGRRFKLVHVHFGREIIEVATFRAH
HSEDDQGDAHRSSHNASGRILRDNVYGTLEEDAQRRDFTINALYYDPVSERILDYANGVH
DVRNRLLRLIGDPTHRYQEDPVRMLRAVRFAAKLDFGIEKHTYLPIRGLAPMLREIPPAR
LFEECLKLFLSGQGAIAFEMLVDLELFEPLFPASAHALDERPTYTHTLISQALNNTDLRV
KQGKPVTPAFLFAALLWPALPARVLHLQNQGVPPIPAMNGAAHDLIAEQCARIAIPKRFT
LPIREIWDMQERLPRRSGKRADMLLDNPRFRAGYDFLLLRESAGEETDELGQWWTDYQDA
NDSERREMIRELGSRDESAGPRKRKRSGSKRKRSGDEAFE
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaagctgttccagtctttccgcccgcccgtaccgggcccgcaccacaggcgc
accacgcccgaggtgatcaacaagagccagcactcgctgcagcgccaccagttcagccgt
catgcggtgaacatcgtggagcgcctgcaaagcgccggctaccaggcttacctggtcggt
ggctgtgtccgcgacctgatgctgggcatcacgccgaaggacttcgacgtcgccaccagc
gccacccccgaacaggtccgtgccgagttccgcaacgcccgcatcattggtcgtcgcttc
aaattggtccatgtgcatttcggccgtgagatcattgaagtcgccaccttccgcgcccac
cactccgaggacgaccagggcgatgcccaccgttcgtcgcataacgccagtggccgcatt
ctgcgagacaacgtgtacggcaccctggaagaggacgcgcaacgccgcgacttcaccatc
aacgccctgtactacgatccggtcagcgagcgcattctcgattacgccaacggtgtgcac
gacgtgcgcaatcgcctgctgcggctgatcggagacccgacccaccgctaccaggaagac
ccggtgcgcatgctgcgcgcggtgcgctttgctgccaagctcgactttggcatcgaaaag
cacacttacctgccgattcgcggcctggccccgatgctgcgcgagattccacccgcgcgc
ctgttcgaggaatgcctcaagctgttcctcagcggccaaggtgccatcgccttcgaaatg
ctggttgacctggagttgttcgaaccactgttcccggccagtgcccacgcgctggacgag
cggccgacctacacccacacgctgatcagccaggcactgaacaacaccgacctgcgcgtg
aagcagggcaagccggtgacgccagccttcctgtttgctgctctgctctggccagccctg
ccggcccgtgtgctgcacctgcagaaccagggcgtgccgccgatcccggccatgaacggt
gcggcccacgacctgatcgccgagcagtgcgcgcgcattgccatccccaagcgttttacc
ctgccgatccgcgagatctgggacatgcaggagcgcctgccgcgccgcagcggcaagcgc
gccgacatgctgctggacaacccgcgtttccgcgccggttacgacttcctgctgctgcgt
gaaagcgccggggaagaaaccgacgaactgggccagtggtggaccgattaccaggacgca
aacgacagcgagcgccgcgagatgatccgcgagcttggtagccgtgacgaaagtgccggc
ccgcgcaagcgcaagcgcagcggcagcaaacgcaagcgcagtggcgacgaggcgttcgag
tga
DBGET
integrated database retrieval system
