KEGG   Pseudomonas alloputida: LU682_025865
Entry
LU682_025865      CDS       T09345                                 
Name
(GenBank) DEAD/DEAH box helicase family protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
pald  Pseudomonas alloputida
Brite
KEGG Orthology (KO) [BR:pald00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pald02048]
    LU682_025865
Enzymes [BR:pald01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     LU682_025865
Prokaryotic defense system [BR:pald02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   LU682_025865
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD HSDR_N HSDR_N_2 Helicase_C Mt_ATP_synt AAA_11 DUF2726 AAA_34 AAA_19 SLFN-g3_helicase PhoH DUF87
Other DBs
NCBI-ProteinID: WJR16531
LinkDB
Position
5571676..5574039
AA seq 787 aa
MDKKSLSERDICSKYIAPAIQHAGWDMHKQVREEVSFTKGRIMVRGKLHSRGEARRADFI
LYHQANLPIAVIEAKDNKHSVGSGMQQALGYAEALDVPFVFSSNGDGFLFHDRSGTDSKV
ETELSLDQFPSPAELWHRYCQWKGLDNAVQHKIEAPYYDDGSGRMPRYYQMNAINRTVEA
VARGQDRVLLVMATGTGKTYTAFQIIWRLWKSKQKKRILFLADRNILVDQTKNNDFKPFG
QAMTKIARRQIDTSYEIYLSLYQAVTGAEEEMNVYKQFSRDFFDLIVIDECHRGSAAEDS
AWREILGYFSNATHVGLTATPKETKEVSSITYFGEPVYSYTLKQGIEDGFLAPYKVVRID
FDKDLQGWRPPKGMLDKNGELIEDRIYNLKDMDRTLVIETRTQLVAQKVTEFLKASDPFQ
KTIVFCDDINHAERMRQALVNLNPERVAENRKYVMRITGDDQEGKAELDNFINPEERYPV
IATTSKLMTTGVDAQTCKLIVLDQHIKSMTEFKQIIGRGTRINEDFGKYWFTIMDFKKAT
ELFADPAFDGDPVVVYAPEGNELPVPPDDLLEGDGISAGSDGESDDLDFTGEEDGKKLIK
YVIDSIPIYVIAERVQYYGPDGRLITESLHDYTRTCVQKQFASLDDFLRHWSDAEQKKVI
IDEMAAQGVMWEALAEEVEKKQGKPLDPFDLICHVAFDQPPLSRKERAEQVKKRNYFAKY
SGAARQVLEALLDKYADTGIEHIEDIKILQLDPFNQLGAPIELVKAFGGKAGYNKAIHEL
EDALYAS
NT seq 2364 nt   +upstreamnt  +downstreamnt
atggacaagaaatcactttccgagcgggacatctgcagcaaatacatcgctccagccatc
cagcacgctgggtgggacatgcacaaacaggtgcgtgaagaggtcagcttcaccaaaggc
cggattatggtccgtggcaagcttcacagccggggcgaagcacgccgtgcagacttcatc
ctctaccaccaagccaacctgcctatcgctgtgatcgaggcgaaggataacaagcactcc
gttggctccggcatgcagcaagcgcttggctatgcagaggcgttggatgtgccgttcgtg
ttctccagcaatggcgatggttttctctttcatgatcgcagtgggacagacagcaaggtc
gaaactgaactctccttggatcagttccctagtcctgccgaactttggcaccgctactgc
caatggaaggggttggacaatgctgttcaacacaagatagaagcgccctactacgacgac
ggctccggacgtatgccgcgctattaccaaatgaacgccatcaaccgcaccgttgaggcg
gtagcgcgcgggcaagaccgcgttctgctggtaatggcaactggcaccggaaaaacctac
accgcctttcaaatcatctggcgactgtggaaatcgaaacagaaaaaaagaatcctgttc
cttgccgaccgcaacatcctggtcgaccagacaaagaacaacgactttaagcccttcggc
caggcgatgaccaaaatcgccagacgccagatagacacctcctacgaaatctacctgtcg
ctctatcaggcggtgactggtgctgaagaagagatgaacgtctacaagcagttctcccgc
gacttcttcgacttgatcgtgatcgacgaatgccaccgtggcagcgccgccgaggactcc
gcctggcgcgagattcttggctacttctccaacgccacccatgtcggcctcaccgcaaca
ccgaaggaaaccaaagaggtgtccagcatcacctacttcggtgagccggtgtacagctac
accctcaaacagggcatcgaggacggttttctcgcgccctataaagtggtgcggatcgac
ttcgacaaagacctacaaggctggcgcccccccaagggtatgctcgacaagaatggcgag
ctgatcgaagaccgcatctacaacctcaaggacatggatcgcactctggtcatcgaaacg
cgcacccaactggtggcgcagaaggtcaccgagttcctcaaggcctccgacccgttccag
aaaaccatcgtcttctgcgacgatatcaatcacgccgagcgtatgcgccaggccttggtc
aacctgaaccccgagcgcgtggctgagaaccgcaagtacgtcatgcgcatcaccggcgat
gatcaggaaggcaaggccgagctggataacttcatcaacccggaagagcgctacccggtc
atcgccaccaccagcaagctgatgaccaccggtgtcgatgcgcagacttgcaagctgatc
gtgctcgaccagcacatcaagtcgatgaccgagttcaagcagatcatcggccgtggcacc
cgcatcaatgaagatttcggcaaatactggttcaccattatggacttcaagaaggccacc
gagctttttgccgacccagctttcgacggagacccagtggtggtctacgcccccgaaggc
aacgagctaccagtcccgcccgacgatttacttgaaggcgatggcatcagcgcagggagt
gatggagaaagcgatgatttggattttaccggcgaggaagacggcaagaagctcatcaaa
tacgtcatcgacagcatcccgatctatgtcatcgccgagcgtgtccagtactacgggccg
gatggccgactgatcaccgaatcgctgcacgactacacccgtacctgcgtgcaaaaacag
ttcgcctcgctggacgactttctgcgccattggagtgatgccgagcagaaaaaggtcatc
atcgacgaaatggcagcccaaggcgtgatgtgggaagccctggccgaagaagtggaaaag
aaacagggcaagccactcgatccgtttgacttgatctgccacgtcgcgttcgaccaaccg
ccgctgtcgcgtaaagaacgcgccgaacaagtgaaaaagcgtaactacttcgccaaatac
tccggtgcagcgcgccaggtgctggaagcgctgctggataaatacgccgacaccggcatt
gagcacatcgaggacatcaaaatcctccagctcgatccctttaaccagctcggtgcaccc
atcgaactggttaaagcctttggcggcaaagctggctacaacaaagctatccatgaactg
gaagacgcgctgtacgccagttaa

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