KEGG   Pseudomonas alloputida: LU682_026025
Entry
LU682_026025      CDS       T09345                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pald  Pseudomonas alloputida
Pathway
pald03030  DNA replication
pald03430  Mismatch repair
pald03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pald00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LU682_026025
   03430 Mismatch repair
    LU682_026025
   03440 Homologous recombination
    LU682_026025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pald03032]
    LU682_026025
   03400 DNA repair and recombination proteins [BR:pald03400]
    LU682_026025
Enzymes [BR:pald01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LU682_026025
DNA replication proteins [BR:pald03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LU682_026025
DNA repair and recombination proteins [BR:pald03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LU682_026025
SSDB
Motif
Pfam: RNase_T Rv2179c-like Pantoate_transf
Other DBs
NCBI-ProteinID: WJR16559
LinkDB
Position
complement(5611255..5611866)
AA seq 203 aa
MERIAVIDFETTGISPGTGCRATEVAVVMLEGGRIVERYQSLMNAGVPVPAFVAGLTGIT
TAMLRSAPPVEKVMNEVAEFVGGTPLLAHNAAFDQKFWDYELGRIGRSRSQPFACSLLLS
RRLLPAAPNHKLGTLTRWAGLPDTGTAHRAMADAEMAANLLQYLAGVLRQDHGVQQLSHE
LLCRLQKTPAAKLREALAKYCRD
NT seq 612 nt   +upstreamnt  +downstreamnt
atggaacgtatcgctgtcatcgactttgaaaccaccggtatttcccccggtaccggctgc
cgtgccaccgaggtggcggtggtaatgcttgagggtgggcgcattgtcgagcgctaccag
agcctgatgaatgctggcgtgccggtgccggccttcgtcgcagggctgaccggcattacc
accgccatgctgcgcagtgcgccgccggtggagaaagtgatgaacgaggtggccgagttc
gtcggtggcaccccattgttggcgcacaacgctgctttcgaccagaagttctgggactac
gagctgggccgtattggccgcagccgcagccagcccttcgcgtgttccctgttgctgtcc
cggcgcctgctgcccgccgcgccgaaccacaagctgggcactttgacacgctgggctggg
ttgccggacacggggaccgcgcaccgggccatggccgatgccgaaatggccgccaacctg
ctgcagtatctggcgggtgtattgcgccaggaccacggggttcagcaactgtcgcacgag
ctgctttgccggctgcagaaaaccccggctgcgaagctgcgcgaagcgctggccaagtac
tgcagggattag

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