Pseudomonas alloputida: LU682_026165
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Entry
LU682_026165 CDS
T09345
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pald
Pseudomonas alloputida
Pathway
pald03030
DNA replication
pald03430
Mismatch repair
pald03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pald00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LU682_026165 (holA)
03430 Mismatch repair
LU682_026165 (holA)
03440 Homologous recombination
LU682_026165 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pald03032
]
LU682_026165 (holA)
03400 DNA repair and recombination proteins [BR:
pald03400
]
LU682_026165 (holA)
Enzymes [BR:
pald01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LU682_026165 (holA)
DNA replication proteins [BR:
pald03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LU682_026165 (holA)
DNA repair and recombination proteins [BR:
pald03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LU682_026165 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
WJR16587
LinkDB
All DBs
Position
5639922..5640959
Genome browser
AA seq
345 aa
AA seq
DB search
MKLAPAQLNKHLQGALAPVYVVSGDDPLLCQEAADAIRNAARQQGFDERQVFSADANFDW
GTLLQAGASLSLFAQRRLLELRLPSGKPGDKGAAALMEYCANPAEDTLLLISLPKLDSSA
QKTKWGKALIEGAHCQFIQIWPVDVHQLPQWINQRLQQAGLSAQRDAVDLIAARVEGNLL
AAAQEIEKLKLLAEGSQITVETVQAAVADSARFDVFGLVDAILNGEAAHALRMLEGLRGE
GVEPPVILWALARELRQLAGLAQQFSQGVPLDKAFSQARPPIWDKRRPLVSKALQRLSAQ
RWAQLLQDAQRIDAQIKGQAEGSPWIGLARLSLLMAGQRLALPPE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgcccccgcccaactcaacaagcacctgcaaggcgccctggcaccggtctac
gtggtcagtggcgacgacccgctgctgtgccaggaagccgccgacgccatccgcaatgcc
gcgcgtcagcaaggtttcgatgaacgccaggtattcagtgccgacgccaacttcgactgg
ggcaccctgctccaggccggtgcaagcctgtcgctgttcgcccagcgccgcctgctggaa
ctgcgcctgccctcgggcaagcccggtgacaagggtgccgctgcgctgatggaatactgc
gccaaccccgccgaagacacgctgctgctgatcagcctgcccaagctcgacagcagtgcg
cagaagaccaagtggggcaaggcattgatcgaaggcgcccattgccagttcatccagatc
tggccggtggatgtgcaccagctcccgcagtggatcaaccagcgcctgcaacaggccggc
ctgtcagcccagcgtgatgccgtcgacctgattgccgcgcgcgtggaaggcaacctgctg
gcagccgcgcaggaaatcgaaaaactcaagctgctggccgaaggcagccagatcaccgtg
gaaaccgtgcaggctgccgtcgccgacagtgcccgcttcgatgtcttcggcctggtcgat
gccattctcaacggcgaggctgcgcatgccctgcgtatgctcgaaggcttgcgcggtgaa
ggtgtggagccgccagtcatcctctgggccttggcccgtgagctgcgccaactggcgggg
ctagcccagcagttcagccaaggcgtgccattggacaaagcgttcagccaggcccgcccg
cccatctgggacaaacgccgaccgctggtcagcaaggccctgcagcgcctctcggcgcag
cgttgggcgcaactgctgcaggatgcccagcgaatcgatgcgcagatcaaagggcaggct
gaaggttcgccgtggattggcctggcgcggctgtcgctgttgatggctggccagcgcctg
gccctccctcccgagtaa
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