Pseudomonas alloputida: LU682_026220
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Entry
LU682_026220 CDS
T09345
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pald
Pseudomonas alloputida
Pathway
pald00550
Peptidoglycan biosynthesis
pald01100
Metabolic pathways
pald01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pald00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LU682_026220 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LU682_026220 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pald01011
]
LU682_026220 (mrdA)
Enzymes [BR:
pald01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LU682_026220 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pald01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
LU682_026220 (mrdA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Glyco_hydro_3_C
Motif
Other DBs
NCBI-ProteinID:
WJR16597
LinkDB
All DBs
Position
complement(5650355..5652244)
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AA seq
629 aa
AA seq
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MSQPIRLKDHEKDARLVRKRVVVGAVAIMLLVCVLIARLYYLQIIQYDYHSTLSENNRVH
VQPIPPTRGLIFDRNGVIVADNRPSFSLSMTRERAGNWQEVLDTIVEVLDLTADDRALFE
KRMRQGRRPFEPVPILFELNEEQIARVAVNQFRLPGVEVVAQLVRHYPQGAHFAHSVGYV
GRINEKELKTLDPVNYSGTHHIGKTGIERFYEAALHGQVGYEEVETNARGRVLRVLKRTD
PKPGKDIVLSLDIKLQEAAEAALGGRRGAVVALDPRTGEVLAMVSQPSFDPNLFVTGISF
KAYAELRDSIDRPLFNRVLRGLYPPGSTIKPAVAIAGLDSGVVNASSRVFDPGYYQLPNY
DHKYRNWNRSGDGWVDLDTAIMRSNDTYFYDLAHKMGIDRLSSYMNKFGIGQRVSLDMFE
ESAGLMPSREWKRATRRQAWFPGETLILGIGQGYMQATPLQLAQATALIANKGVWNRPHL
AKTIEGLPPVDDNPMEDIVLRDKSDWAKVTHGMEQVMHNARGTARKAAAGAQYRIAGKSG
TAQVVAIKQGEKYDRNKLQERHRDHALFVAFAPAEAPKIVVSVMVENGESGSGVAAPVVR
QIMDAWLLDENGRLKPEFAPATVTQESAL
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagccgatccgtctcaaggaccacgagaaagacgcccgcctggtgcgcaaacgc
gtcgtggtcggcgcagtcgcgatcatgctgcttgtgtgcgtgttgatcgcacggctgtac
tacctgcagatcatccagtacgactaccactccacgctgtcggagaacaaccgggtgcat
gtgcagccgatcccgccgacccgcgggctgatcttcgaccgcaacggggtgatcgttgcc
gacaaccgccccagcttcagcctgtcgatgacccgcgaacgtgcgggtaactggcaggaa
gtgctggataccatcgtcgaagtgctggacctcaccgctgacgaccgtgccctgttcgag
aagcgcatgcgccagggccgccggccattcgagccggtgccgatcctgttcgagctcaac
gaagagcagatcgcccgcgtggcggtaaaccagttccgcctgccgggtgtcgaggtggtg
gcacagctggtgcggcattacccgcagggtgcgcatttcgcccattcggtgggttatgtc
gggcggatcaacgagaaagagctgaaaacgctcgacccggtgaactacagcggtacccac
catatcggcaagaccggcatcgagcgcttctacgaggccgccctgcacggtcaggtgggt
tacgaggaagtcgagaccaacgcccgtggccgggtgttgcgggtgctcaagcgcaccgat
ccgaagccgggcaaggacattgtgctgagcctggacatcaagctgcaggaggccgctgaa
gccgccctgggaggccggcgtggtgcagtggttgcgctcgacccgcgaaccggcgaggtg
ctggcgatggtgagtcagcctagcttcgaccccaacctgttcgtcaccggcatcagcttc
aaggcctatgccgagttgcgcgattcgatcgatcggccgctgttcaaccgcgtgctgcgt
ggcttgtacccgccggggtcgaccatcaagccggcggtggctattgccggtctggacagt
ggcgtcgtgaatgccagcagcagggtgttcgaccctggctactaccagctgcccaactac
gaccataaataccgtaactggaaccgctccggggatggctgggtcgacctggacaccgcc
atcatgcgctcgaacgacacctacttctatgaccttgcgcacaagatgggcatcgatcgc
ttgtccagctacatgaacaagttcggtatcggccagcgggtttccctcgacatgttcgag
gagtctgccgggttgatgccgtcgcgcgaatggaagcgtgccacccgtcgccaggcctgg
ttccctggcgaaaccctgattctcggcatcggccagggctatatgcaggccacgccgctg
caactggcccaggccactgcactgatcgccaacaaaggtgtgtggaaccgcccgcacctg
gccaagaccatcgaaggcttgccgccggtagacgacaaccccatggaagacatcgtactg
cgtgacaagtccgactgggccaaggtcacccatggcatggaacaggtgatgcacaacgcc
cgcggtaccgcgcgcaaggcagctgccggagcccagtaccgcattgccggcaagagcggt
accgcccaggtggtggcgatcaagcagggcgagaagtacgatcgcaacaaactccaggag
cgccaccgcgaccatgccctgttcgtcgcgtttgccccagccgaagccccgaaaatcgtg
gtttcggtgatggtcgagaacggtgagtccggctcgggtgtcgccgctccggtggtacgc
cagatcatggacgcctggctgctcgacgaaaatggccggctcaaacccgagttcgcgccc
gccaccgttacccaggaatcggccctgtga
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