Pseudomonas alloputida: LU682_026890
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Entry
LU682_026890 CDS
T09345
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pald
Pseudomonas alloputida
Pathway
pald02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pald00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LU682_026890 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pald02000
]
LU682_026890 (msbA)
Enzymes [BR:
pald01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
LU682_026890 (msbA)
Transporters [BR:
pald02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LU682_026890 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
ABC_ATPase
DEAD
AAA_29
nSTAND3
AAA_30
APS_kinase
NB-ARC
RsgA_GTPase
nSTAND1
DUF815
DUF87
NACHT
AAA_24
DO-GTPase1
Motif
Other DBs
NCBI-ProteinID:
WJR16725
LinkDB
All DBs
Position
complement(5796770..5798578)
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AA seq
602 aa
AA seq
DB search
MAETPRPAEHTSSLKIYFRLLSYVKPYVGIFLLSIVGFVIFASTQPMLAGILKYFVDGLS
NPEAVLFPNVPYLRDLQLLQAVPLLIILIAAWQGLGSFLGNYFLAKVSLSLVHDLRVALF
NKLLVLPNRYFDNHNSGHLISRITFNVTMVTGAATDAIKVVIREGLTVVFLFAYLLWMNW
HLTLVMVAILPVIAVMVSIASKKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGEAY
EQQRFGQASQSNTDKQLRMTKTGSLYTPMLQLVIYSAMAALMFLVLFLRGDSTAGDLVAY
ITAAGLLPKPIRQLSEVSSTIQKGLAGAESIFEQLDEAPEVDTGTVEKERVEGRLEVRNL
SFTYPGTEREVLSDISFVAEPGQMIALVGRSGSGKSTLAALIPRFYHHDKGQILLDGVEI
EHYRLRNLRRHVSQVTQHVTLFNDTVANNIAYGDLAGAPRADIEAAAADAYAKEFVDRLP
KGFDTEVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDHVM
QGRTTLVIAHRLSTIEKADQILVMDQGRLVERGTHTELLAANGHYARLHAMGLDEPAKAD
IT
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaacaccgcgaccagcggagcacacctccagcctgaagatctacttccggctg
ttgagctatgtgaaaccctatgtcggcattttcctgctgagcattgtcggtttcgtgatc
tttgcctcgacccagccaatgctggccggcatcctcaagtacttcgtcgatgggctgagc
aaccccgaagcggtattgttccccaacgtcccctacctgcgcgacctgcaactgctgcag
gcggtgccgctgctgatcatcctgatcgctgcgtggcagggcctgggctcgttcctcggc
aactacttcctggccaaggtctctctgagcctggtgcatgacctgcgggtggcattgttc
aacaagctgctggtgttgcccaaccgctacttcgacaaccacaactccgggcacctgatt
tcgcgcatcaccttcaatgtgaccatggtcaccggcgccgctaccgacgccatcaaggtg
gtgatccgcgaaggcctgaccgtggtgttcctgtttgcctacctgctttggatgaactgg
cacctgaccctggtgatggtcgccatcttgccggtgattgcggttatggtcagcatcgcc
agcaagaaattccgcaagcagagcaagaaaatccaggtagccatgggcgacgtcacccac
gttgcctcggaaaccatccagggttaccgcgtggtccgtagcttcggtggcgaggcctac
gaacagcagcgattcggccaggccagccagagcaacaccgacaagcaactgcgcatgacc
aagaccggctcgctgtacacgccgatgcttcagctggtgatctacagcgccatggctgcg
ctgatgttcctggtgttgttcctgcgcggggactctactgctggtgacctggtggcgtat
atcaccgctgccggcctgctgcccaagccgattcgccagttgtcggaagtcagctcgacc
atccagaagggcctggcaggtgccgagagcatcttcgagcaactggacgaagcgcctgaa
gtggacactggtacggtcgagaaggaacgcgtggaagggcgcctggaagtgcgtaacctg
agctttacctacccgggtaccgagcgtgaagtgctgagcgatatcagttttgtcgccgag
cccgggcagatgatcgccctggtcggccgctccggcagtggcaagtccaccctggcggcg
ctgatcccgcgcttctatcaccacgacaaggggcagatcctgctcgatggcgtggagatc
gagcactatcgcctgcgtaacctgcgtcgccatgtttcgcaagtcacccagcatgtcacc
ctgttcaacgacaccgtggccaacaacatcgcttatggcgatctggccggcgcgccgcgc
gcagacatcgaagccgccgcggccgatgcctatgccaaggaattcgtcgaccggctgcca
aagggcttcgataccgaagtgggtgagaacggtgtactgctttccggtggccagcgccag
cgcctggcaattgcccgtgcgctgcttaaaaacgcgccgttgctgatcctcgacgaagcg
acttcggcgttggataccgagtccgagcggcatatccaggccgccctggaccacgtgatg
caaggccgtaccacgctggtgattgcccatcgcctgtcgaccatcgagaaggctgaccag
atccttgtcatggaccagggccgcctggtcgagcgcggtactcacaccgagctgcttgcg
gctaatggccattatgcccgtttgcatgccatggggctggatgagccggccaaggccgat
atcacctga
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