Pseudomonas alloputida: LU682_027970
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Entry
LU682_027970 CDS
T09345
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
pald
Pseudomonas alloputida
Pathway
pald03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pald00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LU682_027970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pald03019
]
LU682_027970
Messenger RNA biogenesis [BR:
pald03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LU682_027970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
NUDIX_2
Motif
Other DBs
NCBI-ProteinID:
WJR16929
LinkDB
All DBs
Position
complement(6059317..6059796)
Genome browser
AA seq
159 aa
AA seq
DB search
MIDPDGFRPNVGIILTNDAGQVLWARRINQDAWQFPQGGINPDETPEDALYRELNEEVGL
ERDDVEILACTRGWLRYRLPQRLVRTHSQPLCIGQKQKWFLLRLVSNEQRVRMDLTGKPE
FDGWRWVSYWYPLGQVVTFKREVYRRALKELAPRLLTRD
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgacccggatggttttcgccccaatgtcgggatcattctcacgaatgatgccggg
caggtgctatgggctcgacggatcaaccaggatgcctggcaattcccccagggtggtatc
aaccctgacgagacgccggaagacgccctgtaccgcgagctgaacgaagaagttggcctt
gaacgcgacgatgtagaaattcttgcctgcacccgtggctggttgcgttatcgtttaccc
cagcgattggtacgtacccacagccagccgctgtgcatcggccagaagcagaagtggttc
ctgctgcgcctggtgagcaacgaacaacgggtgcggatggacctgaccggcaagccggaa
ttcgacggctggcgctgggtgagctattggtatccgctgggccaggttgtgacattcaag
cgcgaggtgtaccggcgcgccctgaaagagctagcaccgcgtctgttgacgcgcgactga
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