Pseudomonas alloputida: LU682_028395
Help
Entry
LU682_028395 CDS
T09345
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pald
Pseudomonas alloputida
Pathway
pald00300
Lysine biosynthesis
pald00470
D-Amino acid metabolism
pald01100
Metabolic pathways
pald01110
Biosynthesis of secondary metabolites
pald01120
Microbial metabolism in diverse environments
pald01230
Biosynthesis of amino acids
Module
pald_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
pald_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pald00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LU682_028395 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LU682_028395 (lysA)
Enzymes [BR:
pald01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LU682_028395 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WJR17008
LinkDB
All DBs
Position
6147747..6148994
Genome browser
AA seq
415 aa
AA seq
DB search
MNAFNYRDGELFAEGVALSAIAERYGTPTYVYSRAHIEAQYRSYADALQGTEHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSGGELERVLAAGGRADRVVFSGVGKTREDMRRALEVGVH
CFNVESTDELERLQVVAAEMGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEA
IYVRAAQLPNLEVVGVDCHIGSQLTTVEPFLDALDRLLVLVDRLAECGIHLRHLDLGGGV
GVRYRDEQPPRVADYIKAIRERVGERDLALVFEPGRYIVANAGVLLTRVEYLKHTEHKDF
AIIDAAMNDLIRPALYQAWMGVSAVKPRAGEGRAYDLVGPICETGDFLGKDRVLNLAEGD
LLAVESAGAYGFVMSSNYNTRGRCAEILVDGDQAFEVRRRETVAELYAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctttcaactaccgcgacggtgagctgttcgcggaaggcgtggccctgtcggcc
attgctgaacgttacggcacccccacctacgtgtactcgcgcgcccacatcgaggcccag
taccgtagctacgcagacgccctgcaaggcaccgagcacctggtgtgcttcgcggtcaag
gccaactccaaccttggcgtgctgaacgtgctggcgcgcctgggcgcaggcttcgacatt
gtctccggtggtgaactggagcgtgtgctggccgctggcgggcgtgccgaccgcgtggtg
ttctccggcgtcggcaaaacccgtgaagacatgcgccgcgccctggaagttggcgtgcac
tgcttcaacgtcgaatccaccgacgagctggagcgcctgcaagtagtcgccgccgaaatg
ggcaaggttgccccggtgtcgctgcgggtcaacccggacgtcgatgccggtacccacccg
tacatctccaccggccttaaagaaaacaagttcggcatcgccattgccgatgccgaggcc
atctacgtacgcgccgcacagctaccgaacctggaagtggtcggtgtcgactgccacatc
ggctcgcagctgaccaccgtcgagcccttcctcgacgccctcgaccgcctgctggtgctg
gtcgaccgcctggccgagtgcggcatacacctgcgccacctggacctgggtggcggtgtc
ggcgtgcgctaccgcgacgaacagccaccacgggtggccgactacatcaaggccatccgc
gagcgcgtgggcgagcgcgacctggccctggtgttcgaaccaggccgctacatcgtcgcc
aacgccggcgtgctgctgacccgcgtggaatacctcaagcacaccgaacacaaggacttc
gccatcatcgatgcagcgatgaacgacctgatccgcccggccctgtaccaggcctggatg
ggtgtcagcgcggtcaagccacgtgcaggcgaaggccgcgcctacgacctggtcggccct
atctgcgagactggcgacttcctcggcaaggaccgcgtcctcaacctggccgaaggtgac
ctgctggccgtagagtccgcgggcgcctatggttttgtcatgagctccaactacaacacc
cgcggccgttgcgctgaaatcctggtcgacggcgaccaggcgttcgaagtacgccgccgc
gagaccgtcgccgaactgtatgctggcgaaagcctgctgccggagtaa
DBGET
integrated database retrieval system