KEGG   Pseudomonas alloputida: LU682_028395
Entry
LU682_028395      CDS       T09345                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
pald  Pseudomonas alloputida
Pathway
pald00300  Lysine biosynthesis
pald00470  D-Amino acid metabolism
pald01100  Metabolic pathways
pald01110  Biosynthesis of secondary metabolites
pald01120  Microbial metabolism in diverse environments
pald01230  Biosynthesis of amino acids
Module
pald_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
pald_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pald00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    LU682_028395 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    LU682_028395 (lysA)
Enzymes [BR:pald01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     LU682_028395 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: WJR17008
LinkDB
Position
6147747..6148994
AA seq 415 aa
MNAFNYRDGELFAEGVALSAIAERYGTPTYVYSRAHIEAQYRSYADALQGTEHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSGGELERVLAAGGRADRVVFSGVGKTREDMRRALEVGVH
CFNVESTDELERLQVVAAEMGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEA
IYVRAAQLPNLEVVGVDCHIGSQLTTVEPFLDALDRLLVLVDRLAECGIHLRHLDLGGGV
GVRYRDEQPPRVADYIKAIRERVGERDLALVFEPGRYIVANAGVLLTRVEYLKHTEHKDF
AIIDAAMNDLIRPALYQAWMGVSAVKPRAGEGRAYDLVGPICETGDFLGKDRVLNLAEGD
LLAVESAGAYGFVMSSNYNTRGRCAEILVDGDQAFEVRRRETVAELYAGESLLPE
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgaacgctttcaactaccgcgacggtgagctgttcgcggaaggcgtggccctgtcggcc
attgctgaacgttacggcacccccacctacgtgtactcgcgcgcccacatcgaggcccag
taccgtagctacgcagacgccctgcaaggcaccgagcacctggtgtgcttcgcggtcaag
gccaactccaaccttggcgtgctgaacgtgctggcgcgcctgggcgcaggcttcgacatt
gtctccggtggtgaactggagcgtgtgctggccgctggcgggcgtgccgaccgcgtggtg
ttctccggcgtcggcaaaacccgtgaagacatgcgccgcgccctggaagttggcgtgcac
tgcttcaacgtcgaatccaccgacgagctggagcgcctgcaagtagtcgccgccgaaatg
ggcaaggttgccccggtgtcgctgcgggtcaacccggacgtcgatgccggtacccacccg
tacatctccaccggccttaaagaaaacaagttcggcatcgccattgccgatgccgaggcc
atctacgtacgcgccgcacagctaccgaacctggaagtggtcggtgtcgactgccacatc
ggctcgcagctgaccaccgtcgagcccttcctcgacgccctcgaccgcctgctggtgctg
gtcgaccgcctggccgagtgcggcatacacctgcgccacctggacctgggtggcggtgtc
ggcgtgcgctaccgcgacgaacagccaccacgggtggccgactacatcaaggccatccgc
gagcgcgtgggcgagcgcgacctggccctggtgttcgaaccaggccgctacatcgtcgcc
aacgccggcgtgctgctgacccgcgtggaatacctcaagcacaccgaacacaaggacttc
gccatcatcgatgcagcgatgaacgacctgatccgcccggccctgtaccaggcctggatg
ggtgtcagcgcggtcaagccacgtgcaggcgaaggccgcgcctacgacctggtcggccct
atctgcgagactggcgacttcctcggcaaggaccgcgtcctcaacctggccgaaggtgac
ctgctggccgtagagtccgcgggcgcctatggttttgtcatgagctccaactacaacacc
cgcggccgttgcgctgaaatcctggtcgacggcgaccaggcgttcgaagtacgccgccgc
gagaccgtcgccgaactgtatgctggcgaaagcctgctgccggagtaa

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