Pteropus alecto (black flying fox): 102878100
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Entry
102878100 CDS
T02993
Symbol
PRPF38B
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
pale
Pteropus alecto (black flying fox)
Pathway
pale03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102878100 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pale03041
]
102878100 (PRPF38B)
Spliceosome [BR:
pale03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
102878100 (PRPF38B)
Complex C
U4/U6.U5 tri-SnRNP related factors
102878100 (PRPF38B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
102878100
NCBI-ProteinID:
XP_024908073
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MANNSPALTGNSQPQHQAAAAAAQQQQQQQCGGGAATKPAVSGKQGNVLPLWGNEKTMNL
NPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRG
VGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDWF
ESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTRPR
KIKKDGKEGAEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGCSSFDRELERE
KERQRLEREAKEREKERRRSRSIDRGLERRHXXXXXXXXXXXXXRKGDRRDRDREREKEN
ERGRRRDRDYDKERGADREKERERSRERSKERRSRGEVEEKKHKEDKDDRRHRDDKKESK
KEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKSESKEKSNKRSRSGSQGRTD
SVEKSRKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEPESQEKQHK
DKDETV
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaacagccccgcgctgacaggcaactcgcagccgcaacaccaggcggccgca
gccgcggcccagcagcagcagcagcagcagtgcggcggcggcgccgccaccaagccggcg
gtctcgggcaagcagggcaacgtgctgccattgtggggcaacgaaaagactatgaacctc
aaccccatgatcttgaccaatatcctgtcgtcgccctacttcaaagtgcagctctacgag
ctcaagacctaccatgaggtggtggacgagatttactttaaggtcacacatgttgaacca
tgggagaaaggaagcaggaaaacggcaggccaaacagggatgtgcggaggggttcgaggt
gttggaacaggaggaatagtttcgacagctttttgcctgttatacaaattatttactctg
aagttaactcgtaagcaagttatgggtcttataacacacacagactctccatatattaga
gcccttggatttatgtatatacggtatacacagccccctacagatctatgggactggttt
gaatccttccttgatgatgaagaggacctagatgtgaaggctggtggaggctgtgtgatg
accatcggagaaatgctgcggtcttttctcacaaaactggagtggttttctaccttgttt
ccaagaattccagttccagttcagaagaacatcgatcaacagattaaaactcggcctaga
aaaattaagaaagatgggaaggaaggtgctgaggaaatagacagacatgttgagcgcaga
cgttcgaggtctccaaggagatcactgagtccacggaggtccccaagaagatcgagaagt
agaagccatcatcgggagggccatgggtgttctagttttgaccgagaattagaaagagag
aaagaacgccagcgactagagcgtgaagccaaagagagagagaaagaaaggcgacggtcc
cggagtatcgatcggggattagagcgcaggcatnnagnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnntaggaaaggagacagaagagacagggatcgggaaagagagaaagaaaat
gagagaggtagaagacgagatcgcgactacgataaggaaagaggtgctgaccgagaaaag
gagagagaacgatcaagagaacgctccaaggaacggagaagtaggggtgaggtagaagaa
aagaagcataaagaagacaaagatgatcgacggcatagggatgacaaaaaagagtccaag
aaagagaaaaagcacagtagaagtagaagcagagaaaggaaacatagaagtaggagtaga
agcagaaatgcagggaaacgaagtagaagcaggagtaaagagaaatcaagtaaacataaa
agtgaaagtaaagaaaaatcaaataaaagaagtagaagtggcagtcaaggaagaactgac
agtgttgaaaaatcaagaaaacgggaacatagccccagcaaagaaaaatctagaaagcgt
agcagaagcaaagaacgttcccacaaacgagatcacagtgatagtaaggaccagtctgat
aaacacgatcgtcgcaggagccaaagtatagaaccggagagccaagaaaaacagcataag
gacaaagacgagactgtgtga
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