KEGG   Pteropus alecto (black flying fox): 102879325
Entry
102879325         CDS       T02993                                 
Symbol
SDC1
Name
(RefSeq) syndecan-1
  KO
K06257  syndecan 1
Organism
pale  Pteropus alecto (black flying fox)
Pathway
pale04512  ECM-receptor interaction
pale04514  Cell adhesion molecules
pale04820  Cytoskeleton in muscle cells
pale05144  Malaria
pale05205  Proteoglycans in cancer
pale05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:pale00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102879325 (SDC1)
   04514 Cell adhesion molecules
    102879325 (SDC1)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102879325 (SDC1)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    102879325 (SDC1)
  09174 Infectious disease: parasitic
   05144 Malaria
    102879325 (SDC1)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    102879325 (SDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pale04131]
    102879325 (SDC1)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:pale04090]
    102879325 (SDC1)
   00535 Proteoglycans [BR:pale00535]
    102879325 (SDC1)
Membrane trafficking [BR:pale04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    102879325 (SDC1)
CD molecules [BR:pale04090]
 Proteins
  102879325 (SDC1)
Proteoglycans [BR:pale00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   102879325 (SDC1)
SSDB
Motif
Pfam: Syndecan Romo1
Other DBs
NCBI-GeneID: 102879325
NCBI-ProteinID: XP_024901507
LinkDB
Position
Unknown
AA seq 307 aa
MSPGFAELRRALCPCARCPQQIVATNMPPEDQDGSGDDSDIFSGSGAGGLQDITLSHQTS
TWKDTGLLTVMPTAAEPTNTDGIAASTSILPAREVPEEGEGVLLAEVEPGFTTLEKETTH
PPSETTLHPATHRASTARATTSQAPVTSHSHRAVQPDLHETSPPVGPGLPDPHTPNMEDR
GPSATERAAEDGVVTEFPAGEGSGEQDFTFDVSGESTVGAAMEFDQQNEPRDGHGATGAS
QGLLERKEVLGGVIAGGLVGLIFAVCLVGFMLYRMKKKDEGSYSLEEPKQANGGAYQKPS
KQEEFYA
NT seq 924 nt   +upstreamnt  +downstreamnt
atgtctcctgggtttgctgagctccgaagagcactttgcccctgtgcccggtgcccccag
caaattgtggccacaaacatgccccctgaagatcaggatggctctggggatgactccgac
atcttctctggctcaggtgcaggtggtctgcaagatatcaccttatcacatcagacctcc
acctggaaggacacggggctcctgacggtcatgcccacagctgcagagcccaccaacact
gatggcatcgctgcctccacctccatcttgccggctagagaggtgcctgaggagggagag
ggggtgttactggcagaggtggagcctggctttaccaccctggagaaggagaccacccac
ccacccagtgagaccacgctgcacccagccacccaccgagcatcaacagcaagagccacc
acctcccaggcacctgtcacctcccattcccacagggccgttcagcctgacctccatgag
acctcacctccggtaggacccggccttcccgaccctcacactcccaacatggaggacaga
ggtccttctgccactgagagggctgccgaggatggagttgtcactgagttcccagcagga
gagggctctggggagcaggacttcacctttgatgtgtccggagagagcacagttggggct
gctatggaatttgaccagcagaacgagccccgagatggtcatggggccactggggcctcc
cagggcctcctggaaaggaaggaagtgctgggaggggtcattgccggaggcctcgtgggg
ctcatctttgctgtgtgcctggtgggcttcatgctgtaccggatgaagaagaaggacgag
ggcagctactccttggaggagcccaaacaagccaacggcggggcctaccagaagcccagc
aagcaggaagagttctacgcctga

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