Pteropus alecto (black flying fox): 102880446
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Entry
102880446 CDS
T02993
Symbol
SAMD4A
Name
(RefSeq) protein Smaug homolog 1 isoform X1
KO
K27396
protein Smaug
Organism
pale
Pteropus alecto (black flying fox)
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pale03019
]
102880446 (SAMD4A)
Messenger RNA biogenesis [BR:
pale03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
102880446 (SAMD4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHAT_SMAUG
SAM_1
Vts1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
102880446
NCBI-ProteinID:
XP_006920230
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MMFRDQVGVLAGWFKGWNECEQTVALLSLLKRVSQTQARFLQLCLEHSLADCAELHVLEG
EANSPGIINQWQQESKDKVISLLLTHLPLLKPGNLDAKVEYMKLLPKILAHSIEHNQHIE
ESRQLLSYALIHPATSLEDRSALAMWLNHLEDRTSTSFGGQNRGRSDSVDYGQTHYYHQR
QNSDDKLNGWQNSRDSGICINTSNWQDKSLGCENGHVPLYSSSSVPTTINTIGTSTSTIL
SGQAHHSPLKRSVSLTPPMNVPNQPLGHGWMSHEDLRARGPQCLPSDHAPLSPQSSVASS
GSGGSEHLEDQTTARNTFQEEGSGMKDVPAWLKSLRLHKYAALFSQMTYEEMMALTECQL
EAQNVTKGARHKIVISIQKLKERQNLLKSLERDIIEGGSLRLPLQELHQMLLTPIKAYSS
PSTTPEARHREPQAPHPPSLMGPESQSPDCKDSAVASGTAATTSAGASGGLQPHQLSSCD
GELAVAPLPEGDLPGQFTRVMGKVCTQLLVSRPDEENISSYLQLIDKCLIHEAFTETQKK
RLLSWKQQVQKLFRSFPRKTLLDISGYRQQRNRGFGQSNSLPTAGSVGGGMGRRNPRQYQ
IPSRNVPSARLGLLGTGGFVSSTQRNTAANPTIMKQGRQNLWFANPGGSNSMPSRTHSSV
QRTRSLPVHTSPQNMLMFQQPEFQLPVTEPDINNRLESLCLSMTEHALGDGVDRTSTI
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgcgaccaggtcggggtgctggcgggctggtttaagggctggaacgagtgc
gagcagactgttgcgctgctgtcgctgctcaagcgggtgagccagacccaggcccgcttc
ctccagctctgcctggagcattcgctggccgactgcgcagagctgcacgtcctcgagggc
gaggccaacagccccggaatcattaaccaatggcaacaggaatccaaggataaagtgatt
tccctcctgttaactcacctgcctttgctaaagccaggaaaccttgacgcaaaagtagag
tatatgaaactgctgcccaaaatcctggcgcactctattgaacacaaccagcacatcgag
gagagcaggcagctgctgtcctatgctttgatacatccggccacttcattggaagaccgc
agtgctttagccatgtggctgaatcacttggaggaccgcacgtcgaccagcttcggtggc
cagaaccgaggtcgctcggactctgtggattatgggcagacgcactactaccaccaaaga
cagaactccgacgacaagctcaatgggtggcagaactctcgggattctggtatttgcatc
aacacttccaactggcaggacaaaagtctggggtgtgagaatggccacgtgcccctctac
tcctcctcatccgtccctaccacaatcaatacgattggaaccagcacaagtacaattctc
tcaggccaggcacaccacagccctttgaaacgatctgtgtcccttaccccacccatgaat
gtgccaaaccagcctctaggacatggatggatgtctcatgaggacttgcgagctagagga
ccccagtgcctcccatccgatcatgcccccctgtctccacaaagcagtgtagcctcttca
ggaagtggtgggagtgaacacttagaagatcagaccactgctcgtaacacattccaagaa
gaaggtagtggtatgaaagatgttccagcctggttaaaaagcctccgcctgcacaagtat
gctgcgctgttctcccagatgacctatgaggaaatgatggccctcaccgagtgccagctg
gaggctcagaatgttaccaaaggtgcaagacacaaaattgtcatcagtattcagaagctc
aaagaaagacaaaacctcctgaagtctttggaaagggacatcatcgaggggggcagcctg
cgcctccctctccaggaactgcaccagatgctcctgactcccatcaaggcctacagctcc
ccgagcaccaccccagaagctcgccaccgggagccccaggccccgcacccaccttccctg
atgggccccgagagccagagccccgactgcaaagacagcgctgtggccagcggcaccgca
gccaccacctcagccggcgccagcggcggactccagccacaccagctgagcagctgtgac
ggggagctggctgtcgccccgctgccagagggggatcttcctggccagttcacacgtgtc
atggggaaagtgtgcacacagctcttggtctccagacccgatgaggaaaatataagttcc
tatctacagctcatagacaagtgtctaattcatgaggcatttacagagacgcagaaaaaa
agattgttgtcatggaaacagcaggtgcagaagctctttcggtctttccctcggaaaacc
cttctagacatatcaggatatcgacagcaaagaaatcgcggttttgggcagtccaactcc
ctcccgacggccggctctgtgggtggcggcatgggcagacggaacccacgccagtaccag
atcccctctcggaatgtcccctccgcccgccttggcctcttgggcaccggtgggttcgtc
agctccacccagcgcaacaccgcagccaaccccaccatcatgaaacaaggaagacagaac
ctctggttcgccaaccccgggggcagcaacagcatgccaagccgcacccacagctcagtc
caaaggacccgctcgcttcctgtgcacacttctccacaaaatatgctgatgttccagcag
ccagaattccagcttcctgtgactgaacctgacatcaataacaggctggagtccttgtgc
ctcagtatgaccgagcacgctctgggagacggtgttgaccggacctccacaatctag
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