Pteropus alecto (black flying fox): 102880651
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Entry
102880651 CDS
T02993
Symbol
RC3H1
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
pale
Pteropus alecto (black flying fox)
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pale03000
]
102880651 (RC3H1)
04121 Ubiquitin system [BR:
pale04121
]
102880651 (RC3H1)
Transcription factors [BR:
pale03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
102880651 (RC3H1)
Ubiquitin system [BR:
pale04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102880651 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
FYVE
zf_CCCH_4
zf-CCCH_4
PaaA_PaaC
Vesi_VP2
Baculo_IE-1
zf-RING_4
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
102880651
NCBI-ProteinID:
XP_006907855
UniProt:
L5KXR5
LinkDB
All DBs
Position
Unknown
AA seq
1125 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSPSVLPDE
GAVDLPSRKAPALPNGIVSAGSTVTQLIPRGTDPSYDSSLKPGKIDHLSSSAPGSPPDLL
ESVPKSISALSVTPHPVPPRGPADLPPVPVPKRGSQLYPAPQADVYYPDPRGAPPFEPAP
YQQGVYYTPPPQCVSRFVRPPPSAPEPGPPYLDHYPPYLQDRVVSSQYGTQPQQYPPMYP
PHYDGRRVYPAPPREELFRESLIPIEIPAAVPPYVPESRERYQQMEGYYPVAPHPTQIRP
SYIREPPYSRLPPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSPTLPPTFHQEE
FLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAAGSAEMMNVESKGMRD
QRLDHQRRATEASDDDLIPFGDRPTVSRFGAISRTSKTIYQGAGPMQAMAPQGAPTKSIN
ISDYSPYGAHGGWGGSPYSPHQNLPSQGHFSERERISMSEVASHGKPLPSAEREQLRLEL
QQLNHQISQQTQLRGLEAVSNRLVLQREANTLAGQSQPPPPPPKWPGMISSEQLSLELHQ
VEREIGKRTRELGMENQCSVDIKSKLNTSKQAENGQPEPQNKVPAEDLTLTFSVNSDVPN
GSALTQENVSLLSAKTGSLSLSEDPEGGGDNSDSQRSGVAPGSAP
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaagctccgcagtggacggatttcctctcctgcccaatttgcactcagact
ttcgacgaaactatccggaagcccatcagtttgggctgtggccatactgtctgcaagatg
tgcctgaataaactccaccgcaaggcttgcccatttgaccagaccactatcaatacagac
atcgagctccttcctgtgaactcagcattgctgcagctcgtgggtgctcaggtccctgag
cagcagcccattactttgtgtagtggggttgaagataccaagcattatgaggaggccaag
aaatgtgtggaagagttagcattgtacctgaaaccacttagcagtgctagaggagtgggt
ctgaacagcactactcagagtgttctgagtcgcccgatgcagaggaagctggtgactctg
gtccactgccaactagtggaagaagaaggcaggatccgtgccatgcgagcagctcgatct
ttaggtgaacgaacagtcacggagctgattctccagcaccagaatcctcagcagctctct
tcgaatctgtgggcagcggtcagggcgaggggatgccagttcctgggaccagcaatgcag
gaggaagctctaaagctggttctcctggccttggaagatggttctgctttgtcaagaaaa
gtattggttctcttcgtggtgcagaggctggagccacggtttcctcaggcttctaaaact
agcatcgggcacgtcgtccagctcctttacagggcttcctgcttcaaggtcaccaaacgt
gatgaagactcttctttgatgcagctgaaagaagaatttagaacctacgaagctctgcgg
cgagaacatgactcccagatagtgcagatcgctatggaagcaggcttacgcattgcaccg
gaccagtggtcctctttgctgtatggagaccagtctcacaaatctcacatgcagtccatt
atcgacaagttgcagaccccagcctcttttgcacaaagtgttcaggaactaacaattgct
ctccagcggactggagatccagccaacttgaaccgactaagaccccatttggagctatta
gcaaacattgaccctagtccagatgctcctcctcctacttgggaacagctagaaaatgga
ctggttgctgtgcgtacggtggtccatggcctggtagattatatccagaaccacagcaag
aaaggagcagatcaacagcagcctccacagcacagcaaatacaaaacatatatgtgtcgt
gatatgaagcagagaggaggatgccctcgcggggccagctgtacgttcgcacactcacag
gaggaactggaaaaatttcgtaaaatgaacaaacgcctggttcccagaagacccctgagt
gcctctttgggtcagcttaacgaagtaggcctgccttctccgtctgtcctcccggatgaa
ggtgccgtggacctgccgagcagaaaagcccccgccctgccaaatggcattgtgtcagca
gggagtacagtaacacagctgattccgcgggggacagaccccagctacgattctagcctg
aaaccagggaagatcgatcatctgagcagcagcgcccccggatctcctcctgacctgctg
gagtctgtccccaagagtatttccgccttatctgtgactccacaccccgttcctccgagg
gggccagcagacctgcctcctgtacctgtccccaagcggggctctcagctgtacccagca
ccgcaggcggacgtgtactacccagacccgcgaggggcgccgccgttcgaaccagcccct
taccagcagggtgtgtactatactccgccaccgcagtgtgtgtcccgctttgtccgacct
ccaccgtctgctccggaaccgggtcctccctacttggatcattacccaccttacctccag
gaccgcgtagtcagctctcagtacggcacacagccacagcagtacccgcccatgtacccg
ccgcactatgatggccggcgagtgtaccctgctcctcctagagaggagcttttccgagaa
agtctcatacccattgagatccctgcggcagtaccgccctacgtgccagaatccagagaa
agataccaacagatggagggttactatccagtggcccctcatccaactcagatcagacct
tcgtacatcagagagcctccttatagccggcttcctccccctccccagccccatcctagc
ctagatgagctgcatcgaagacgaaaggagataatggcccagctagaggaaaggaaagtg
atctcgccgcctccttttgcgccttcaccaaccttgcctcccaccttccatcaagaggaa
tttttggatgaagacttgaaagtagctgggaaatacaaaggaaatgattatagccagtat
tctccctggtcatgtgacaccatcggctcctacattggaaccaaagatgcaaaacccaaa
gatgttgtggcagcagggagcgcggaaatgatgaatgtggagagtaaaggaatgcgagac
cagcgattggatcatcagagaagagccacggaagccagtgacgacgacctcatcccgttt
ggagatcgaccaacagtctctcggtttggtgccatctctcgaacttccaaaacgatatat
cagggtgctggcccaatgcaggccatggcgcctcagggagctcccacaaaatctatcaac
atttcagattacagtccgtatggagcccatggcggctggggcgggtctccgtactcccct
catcaaaacctaccttctcagggacacttcagtgagagagagagaatatccatgtcggaa
gtggccagtcatggaaaaccccttccgtctgctgagagggagcagctccgactagaattg
cagcagctgaaccatcagattagccagcagacccagctacgtggactagaggctgttagt
aacaggctggtgttgcagagggaggcgaacaccctggcaggccagtcacagcccccaccg
ccacctccaaagtggcccggaatgatctccagtgagcagctgagcttggaactgcaccag
gtggaaagggaaatcggcaagagaacccgggagctgggcatggagaaccagtgttctgtg
gacataaaaagcaaattgaatacaagtaagcaagcagaaaatggacagccggaaccacaa
aataaggttccagctgaggaccttacattgacattcagtgttaacagtgatgtgccgaat
ggatcggccttgacacaagagaatgtcagcctcctgtcagccaagactggctctctgagc
ctgtccgaggaccccgaggggggcggagacaacagcgactcccagaggtcgggagtggca
cccggttctgctccctga
DBGET
integrated database retrieval system
