Pteropus alecto (black flying fox): 102880885
Help
Entry
102880885 CDS
T02993
Symbol
PABPC1L
Name
(RefSeq) polyadenylate-binding protein 1-like
KO
K13126
polyadenylate-binding protein
Organism
pale
Pteropus alecto (black flying fox)
Pathway
pale03015
mRNA surveillance pathway
pale03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102880885 (PABPC1L)
09123 Folding, sorting and degradation
03018 RNA degradation
102880885 (PABPC1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pale03019
]
102880885 (PABPC1L)
03041 Spliceosome [BR:
pale03041
]
102880885 (PABPC1L)
Messenger RNA biogenesis [BR:
pale03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
102880885 (PABPC1L)
mRNA cycle factors
Stress granule specific factors
102880885 (PABPC1L)
Spliceosome [BR:
pale03041
]
Complex C
Other components
Complex C specific factors
102880885 (PABPC1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
PABP
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
102880885
NCBI-ProteinID:
XP_024895495
LinkDB
All DBs
Position
Unknown
AA seq
682 aa
AA seq
DB search
MNASGPIFPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQ
QPADAERALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFS
TFGNILSCKVVCDDHGSRGFGFVHFETHEAAQLAISTMNGMLLNDRKVFVGHFKSRQERE
AELGARAMEFTNIYVKNLQVDMDEWGLQELFSQFGKMLSVKVMRDDSGHSRGFGFVNFEK
HEEAQKAVMDMNGKEVRGRLLYVGRAQKRMERQNELKRKFEQMKQDRLNRYHGVNLYVKN
LDDSINDEKLRKEFSPYGMITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGT
KPLYVALAQRKEERKAILTNQYMQRLSTVRALGGPLLGSFQQPANYFLPAVPQPPAQAAY
YGSGPPLQPAPRWTAQPPRSSCASMVWTPATSRRPLAHVSSVRQASTQAPQQVPHTQRVA
NIGTQTTGPNVVGCSMPGGPLLTHRYSLATPNTPGVQEPAVCIPGKEPLTASMLAAAPLH
EQKQMIGERLYPLIYDVHTQLAGKITGMLLEIDNSELLLMLESPESLNAKVEEALAVLQA
HQKMESSLPWLREQRFLLLARRPCEPLGPNIHAGGNTEPDKAIQGQGSASQSGAGAQNTG
DYAKDGAGMAALENQLNRLLWV
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccagcggcccaatctttccgctcgcttcgctctacgtgggcgacctgcacccc
gacgtaacggaggccatgctctacgagaagttctcgcctgccggccccatcctgtccatc
cgcgtgtgccgcgacgtggccacccgccgctcgctgggctatgcttatatcaacttccag
cagccagccgacgcggagcgggcactggacacaatgaactttgaagtgataaaaggccag
cccatccgcatcatgtggtcccagcgagacccaggacttcgcaagtcaggtgtgggcaac
atcttcatcaagaacctggaggactccattgacaacaaggccttatatgacaccttttct
acttttgggaacatcctctcttgcaaggtggtgtgtgatgatcacggttcccgaggcttt
ggctttgtccatttcgagacccatgaggctgcgcagctggccatcagcaccatgaatggg
atgctgctgaatgaccgtaaagtcttcgttggccacttcaagtcccgacaagaacgggag
gccgagctgggggctcgggccatggagttcaccaacatctatgtgaagaacctccaagtg
gacatggatgagtggggcctgcaggagctcttctcccagtttgggaagatgctgagtgtg
aaggtgatgagggatgacagcggccactcccggggctttggctttgtcaactttgagaag
catgaggaagcccagaaggctgtgatggacatgaacggaaaggaagtgagagggcggctg
ctctatgtgggccgggctcagaagcggatggagcggcagaatgaactgaagcgcaagttc
gagcagatgaagcaggaccggctgaaccgttaccatggcgtgaacttgtatgtgaagaac
ctagatgactccatcaatgatgagaaactaaggaaagaattctctccctatggaatgatc
accagtgccaaggtgatgacagagggtggccacagcaaagggtttggctttgtgtgtttt
tcctctccagaagaggcgacgaaggccgtgacagagatgaatgggcgcatcgtcggcacc
aagccgctttacgtggccctggcccagcgcaaagaggagcggaaggccatcttgactaac
cagtacatgcagcgtctctccactgtgcgggccctgggtggccccctcttgggctccttc
cagcagcccgccaactacttcctgcccgctgtgccccagcctccagcccaggctgcatac
tatggctctggcccacctcttcagcctgcccccaggtggacggcccagccgcccagatcc
tcgtgtgcctcaatggtttggacaccagccacgtcgcggcgtcccctggcccacgtcagc
agtgttaggcaggcttccactcaggcgccacaacaggtgccccacacccaaagagtggcc
aacattggtacccagaccactggacccaatgtggtgggatgctcgatgccaggcgggcct
ctcttgacacacagatattctttggcgacacccaatacccctggggtccaggagcctgct
gtgtgcatccctggaaaggagcccttgaccgcgtccatgctggccgcagcacctttgcac
gagcaaaagcagatgattggtgagcgtctctacccccttatctatgacgtccacacccag
ctggctggcaagatcacgggcatgctgctggagattgacaactcagagctgctgctcatg
ctggagtctccagagtccctcaatgccaaggtcgaagaggctttggctgtgttgcaggct
caccagaaaatggaatcctcactcccttggctgagagaacagcgtttcctgctcttggct
cgaaggccctgtgaaccgttaggccccaacatccacgcaggaggcaacacagagccagac
aaagccatccagggtcagggttctgcatcccaaagcggggctggagctcaaaacacaggg
gattatgccaaggacggggcagggatggcagccctggagaaccagctcaacaggctgctt
tgggtgtag
DBGET
integrated database retrieval system
