Pteropus alecto (black flying fox): 102881645
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Entry
102881645 CDS
T02993
Symbol
YTHDC2
Name
(RefSeq) probable ATP-dependent RNA helicase YTHDC2 isoform X1
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
pale
Pteropus alecto (black flying fox)
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pale03041
]
102881645 (YTHDC2)
Enzymes [BR:
pale01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102881645 (YTHDC2)
Spliceosome [BR:
pale03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102881645 (YTHDC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
HA2_C
OB_NTP_bind
Helicase_C
R3H
DEAD
HA2_N
Ank_2
AAA_19
nSTAND3
Ank
AAA_22
ATPase
PhoH
AAA_7
AAA_16
UvrD-helicase
AAA_29
Ank_4
T2SSE
ABC_tran
SRP54
Sigma54_activat
AAA_23
Motif
Other DBs
NCBI-GeneID:
102881645
NCBI-ProteinID:
XP_006913349
UniProt:
L5KLX8
LinkDB
All DBs
Position
Unknown
AA seq
1438 aa
AA seq
DB search
MSRPSSVSPRPPAPGGGGGGGGGSGGGGGLAQCGPGGGGRAKGLKDIRIDEEVKIAVNIA
LERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTVKKKDGSETAH
AMMTCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTERGNVFAVEAENREMSKTSGRLNN
GIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLD
DCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCT
NGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALD
VNLFIRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGYTNKEMLKYKKEKQREEKQQTTLT
EWYSAQENTFKPESQRQRTVPNVTEEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDAC
LSDIWLHKDVDAFAQVFHLILTENVSVDYRHSETSATALMVAAGRGFSSQVEQLISMGAD
VHSKASNGWMALDWAKHFGQTEIVDLLESYSASLEFGNLDESSLVQTNGSDLSAEDRELL
KAYHHSFDDEKVDLDLIMHLLYNICHNCDAGAILIFLPGYDEIVGLRDRILFDDKRFADN
THRYQVFMLHSNMQTSDQKKVLKNPPTGVRKIILSTNIAETSITVNDVVFVIDSGKVKEK
SFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMP
LQELCLHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHL
ADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAG
TFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRA
RGGGDIRDVNTNSENWAVVKAALVAGMYPNLVHVDRENVLLTGPKEKKVRFHPTSVLSQP
QYKKIPPANGQAAAIQALPTDWLIYDEMTRAHRIANIRCCSAVTPVTVLVFCGPARLASN
ALQEPTSFRADGIPNDSSDSEMEDRTTANLAALKLDEWLSFKLEPEAASLLLQLRQKWHS
LFLRRMRAPSKPWSQVDEATIRAIIAVLSTEEQSAGLQQPSGIGQRPRPMSSEELPLASS
WRSNNSRKTSADTEFSDESTTAERVLMKSPSPALHPPQKYKDRGILHPKRSTDDRSDQSS
VKSTDSSSYPSPCASPSPPSSGKGSKSPSPRPNMPIRYFIMKSSNLRNLEISQQKGIWST
TPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRMSSEIGREKSQDWGSAGLGGVFKVE
WIRKESLPFQFAHHLLNPWNDNKKVQISRDGQELEPQVGEQLLQLWERLPLGEKTTTD
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggccgagcagcgtctcccctcggccgccggctcctggaggaggcggcggcggc
ggtggtggcagcggcggcgggggcggcctcgctcagtgtggccctgggggcggcggccgg
gccaaggggctgaaggacattcgtatagacgaagaggtgaagatcgcagtcaatatcgct
ctggagcgcttccgatatggggaccagagagaaatggaatttccttcttctctgaccagt
actgaaagagcctttatccatcgattgagtcagtctcttggtttggtctctaaaagtaaa
ggaaagggagcaaatagatacctaactgtgaagaagaaagatggatcagaaacagctcat
gcaatgatgacctgtaatttgactcataatacaaaacatgctgttaggagcctaattcaa
agatttcctgtcaccaataaagagcgtactgaacttctgcctaaaacagaaagaggaaat
gtgtttgcagttgaagctgaaaaccgggaaatgagcaagacaagtgggcgactcaacaat
ggcatacctcaaattccagtgaaaagaggagaatctgaatttgattctttcaggcagtct
ctgccagtgtttgagaaacaagaagaaattgttaaaataattaaggaaaataaagtagtt
ttgattgtaggagaaactgggtctggaaagactacgcagatcccacagtttcttttagat
gattgttttaaaaatggtatcccctgccgtatattttgtactcagccaagacgattagca
gctattgctgtggctgaaagagttgctgcagagagaagagagaggattggtcaaacaatt
gggtatcagatacgattagaaagcagagtttctccaaagacacttctgacattttgcaca
aatggagtattgcttcgtacattgatggcaggagatagtacattgtcaactgtgacacat
gtaattgtggatgaagtacatgaaagggatcgatttagtgattttctacttacaaagtta
agagatttgttgcaaaagcacccaactttgaaactaattctttctagtgcagccttggat
gtaaatctgtttataagatattttggaagttgtccagtgatatatattcaaggaagacca
tttgaagtaaaagaaatgtttctggaagacattttaagaactactggatacacaaacaaa
gaaatgttaaaatacaaaaaggaaaaacagcgagaagagaaacaacaaaccacacttaca
gaatggtattcagctcaagagaatactttcaaacctgaatctcagaggcagagaactgtt
ccaaatgtgactgaagagtatgatttattggatgatggtggtgatgccgtgttcagtcag
ttgacagaaaaagatgtgaattgccttgaaccatggttaataaaggaaatggatgcttgt
ctttctgacatatggctgcataaagatgttgatgcctttgctcaggtttttcaccttatt
ttaactgaaaatgttagtgttgattacagacatagtgaaaccagtgcaacagctttgatg
gttgctgcaggacgaggtttttcaagtcaagtagagcagttaattagtatgggagccgat
gtccatagcaaagcatcaaatggctggatggctttagattgggctaaacactttgggcag
actgaaattgtagatcttctggaatcttacagtgcttcattggagtttggaaatctagat
gaaagttctctggttcaaacaaatggaagtgacctcagtgcagaagacagagaactcttg
aaagcttatcatcatagtttcgatgatgaaaaagtagacttggatttgatcatgcatctt
ctatataatatctgccataattgtgatgctggtgcaatattaattttcctacctggatat
gatgaaattgttggactgagagatcgcatcctatttgatgacaagcggtttgctgacaat
acacatagatatcaagtctttatgcttcattcaaatatgcaaacatctgatcaaaagaaa
gtattaaaaaacccacctacaggtgttcgaaaaataatcctttccaccaatattgctgaa
accagcatcacagtcaatgatgttgtctttgttattgattctggtaaggtgaaagagaaa
tcctttgatgcactgaattttgttacaatgttaaaaatggtttggatttccaaagctagt
gccatacaacgaaaaggcagggcaggacgatgtagacctggaatttgtttccggctgttc
agtagactccgattccaaaatatgttggaatttcagactccagaacttttgagaatgcca
ttacaggaactttgtttacataccaagctgttagccccagttaattgtccaattgctgat
ttccttatgaaagctcctgaacctccaccagctctaattgtaagaaatgctgtacagatg
ctcaagacaatagatgcaatggatacatgggaagatctcactgaactgggatatcatttg
gctgacttgccagtagaaccacatcttggtaaaatggtcctgtgtgctgttgttttaaag
tgtctggaccccatccttacaattgcctgcacactagcgtatcgagatccttttgtcctg
ccaacccaggcctctcaaaaacgtgcagctatgctttgtagaaaacgtttcactgcagga
actttcagtgatcatatggcacttctcagagcatttcaggcatggcagaaagcacgaagt
gatgggtgggagcgagccttttgtgaaaagaattttctttcacaagctaccatggaaata
atcataggcatgagaactcagttgcttggtcaacttagagcatcaggttttgttagagca
cgaggaggtggtgacattagagatgttaacacaaattctgagaactgggctgttgttaaa
gctgcattggtggcaggcatgtatcctaatttagtccatgtggacagagagaatgtattg
ttgacagggccaaaggagaaaaaagtacggtttcatcctacttcagttctcagtcagcct
caatataaaaagattcctccagccaatggtcaagctgcagcaattcaggcactgcccaca
gattggcttatttatgatgaaatgaccagagcccatcgaatagctaacattagatgttgt
tcagcagttacacctgtaactgtattagtattctgtggaccagcaaggttggcaagtaat
gctcttcaggaacctacatcttttcgagcggatggtattcctaatgacagcagcgatagt
gaaatggaagatagaactactgctaacttggcagctttgaaacttgatgagtggctcagt
ttcaaactagagcctgaggcagccagtttattgctgcagctcagacagaagtggcacagc
ttatttttacgccgaatgagagctccatctaaaccttggtctcaagttgatgaagctacc
attagagcaattatagctgttttaagtactgaagaacagtcagcaggtttacaacaacca
tctgggattggccaaaggccaaggcctatgtcttcagaagaacttcctttggcatcatct
tggaggtcaaataacagtagaaaaacgtcagcagatactgaattttctgatgagtctact
actgcagaaagagtgttgatgaaatctccatctccagcactacatccacctcagaagtac
aaagatagaggaattttacatcccaaacgaagcactgatgaccgatcagatcaatcttct
gtgaaatctacagatagcagtagttacccaagtccgtgtgctagtccttctcctccgtcc
tcaggaaagggttcaaaatctccttcaccaagaccaaacatgcctattcgatacttcata
atgaagagtagcaatttgagaaaccttgaaatttctcagcagaagggtatctggtctaca
acccctagtaatgagcggaagctaaatcgagccttttgggaaagcagcatggtttacttg
gtattttctgttcaaggatctggacatttccagggattttctaggatgtcttctgagata
ggaagggagaagagccaggactggggctcagctggactaggaggagtatttaaggtggag
tggatacgaaaagaaagtcttccctttcagtttgcacaccatttactcaatccttggaat
gataacaagaaagtccagataagcagagatgggcaggaactagaacctcaggttggggaa
cagttgctccagttatgggaacgccttccattgggagaaaaaaccacaactgattga
DBGET
integrated database retrieval system
