Pteropus alecto (black flying fox): 102884488
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Entry
102884488 CDS
T02993
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
pale
Pteropus alecto (black flying fox)
Pathway
pale03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102884488 (DHX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pale03041
]
102884488 (DHX8)
Enzymes [BR:
pale01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102884488 (DHX8)
Spliceosome [BR:
pale03041
]
Complex C
Other components
Step II factors
102884488 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
Flavi_DEAD
AAA_16
T2SSE
TsaE
PhoH
Sigma54_activ_2
OB_RRP5_4th
ABC_tran
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
102884488
NCBI-ProteinID:
XP_006910150
UniProt:
L5KRR0
LinkDB
All DBs
Position
Unknown
AA seq
1216 aa
AA seq
DB search
MAVAVAMAGAVNGTELGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKN
TTFDTFKSSLVKNGAEFTDSLVSNLLRLIQTMRPPAKPSTSKDPVVKPKTEKEKLKELFP
VLCQPDNPSVRTMLDEDDVKVAVDVLKELEALMPSAAGQEKQRDAEHRDKSKKKKRSRSR
DRERDRDRDRERDRDRDHKRRHRSRSRTRERNKGKSRYRSRSRSQSPPKDRKDRDKYGER
NLDRWRDKHVDRPPPEEPAIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREG
RVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNLVGETNEETSM
RNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFDEETG
ILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAK
ERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIPEWKKHAFG
GNKASYGKKTQMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAE
AGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDG
MLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVK
FSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQE
EIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAET
SLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYT
ERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTL
GALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDK
QALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLG
IMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNR
QPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLYNR
YEEPNAWRISRAFRRR
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggctgtggctatggcgggagccgtaaacgggacggagctgggccccgcagaa
gaactcgccaaactcgagtatctgtctttagtgtcgaaggtttgcactgagctggacaat
cacctgggaatcaacgacaaggatctggctgaatttgtgatcagtcttgctgagaaaaat
accacctttgatacttttaagtcttctctggtcaaaaatggtgcagaattcacggattcg
cttgtaagtaacttgctgcgtctcatacaaaccatgcggcctccagcaaagccttctact
agcaaagatccggttgttaaacccaaaactgaaaaagaaaaactgaaggaactcttccca
gtcctttgccaaccagacaacccttctgttcggaccatgctggacgaggatgatgtgaaa
gttgctgtggatgtcctaaaagaactggaggccttaatgcccagtgcagcaggccaggag
aaacaaagagatgctgagcaccgggacaagtcaaagaagaagaagcggagccggagccgg
gatcgagagcgagaccgtgaccgtgaccgagagcgagaccgcgatagagaccacaaacgg
agacaccggtcccgctccaggacccgggagaggaataaagggaagtctagatatcggtct
aggagtagaagtcagagtcccccaaaagaccggaaggaccgagacaagtatggagagagg
aatctggacagatggcgggataagcatgtggaccgccctcccccggaagagcccgccatt
ggggacatttacaatggcaaagttaccagcatcatgcagtttggttgctttgtgcagctg
gagggactaaggaagcggtgggaaggcctggtgcacatctctgagctccggagggaaggc
cgtgtggccaatgtggctgatgtggtgagcaaaggccagagggtcaaggtcaaagtgctg
tccttcactgggaccaagaccagtctgagcatgaaggatgtagatcaagagaccggagaa
gatctaaacccaaatcgacgacgaaatcttgttggggagaccaatgaggagacctcgatg
aggaatccagacagacccactcacctgtccctcgtcagcgcccctgaagtagaagatgac
tcactggagcgcaagcgccttacccgcatctctgacccagagaagtgggagatcaaacag
atgattgctgccaacgtcctttccaaagaagagtttccagactttgatgaagagactggc
attctccctaaagtggatgacgaagaagatgaggaccttgagattgaactggttgaggaa
gagcctccattcctgagagggcacaccaagcaaagcatggacatgagccctattaaaatt
gttaagaacccagacggctccctctcccaagcagcaatgatgcagagtgccttggccaaa
gagagacgggaactcaagcaggcccagcgggaagccgagatggattctatacccatggga
ctcaacaaacactgggttgatcctctgcctgatgcggaaggcaggcagattgctgccaat
atgaggggtattgggatgatgcccaatgacattcctgagtggaagaagcatgcctttggg
ggcaacaaagcttcttatggaaagaagacccagatgtcaatcattgagcagagagagagc
ctgcccatctacaaactgaaggagcagctggtccaggctgtccatgacaatcagatcctg
attgttattggggagacaggatctgggaaaacaacgcagatcacccagtacctggcggag
gcaggctacacttccaggggcaagattggatgtacccagccaagaagagtggcagccatg
tcagtggccaaaagggtgtcagaggagtttggctgttgcttaggtcaagaggtgggctac
accattcgatttgaggactgcaccagccccgaaacagttatcaagtacatgacagatggg
atgttgctccgagagtgcctgattgaccccgacctcactcagtatgcgatcatcatgttg
gatgaggcacacgagaggacaattcacactgacgtgctctttggattgttgaaaaagaca
gttcagaaacggcaggacatgaagctgattgtcacctcagccacattggatgcagtgaag
ttttctcagtacttctatgaagctcccatcttcaccattcctggtcgaacatatccggtg
gaaatactgtatacaaaggaacctgagacagattatctggatgccagcttgatcactgtc
atgcagatccatttaacagaaccaccaggtgacatcctggtcttcctgactggtcaggaa
gagattgatactgcttgtgagatcctgtatgaaagaatgaaatctctgggacctgatgtt
ccagagctgatcatcctccctgtatactctgctctgcccagtgagatgcagacccgaatc
tttgacccagctccacccggcagcagaaaggtcgtgattgccaccaacattgcagagaca
tcactgaccatcgacggcatctattatgtggtggaccctggatttgtgaagcagaaagtt
tacaattccaagacagggattgaccagctggtggtgactcctatttctcaggctcaggca
aagcaacgagctggcagagctgggagaacaggcccagggaagtgttacaggctgtacaca
gaacgtgcctaccgagatgaaatgctgaccaccaacgtgccggaaatccagagaaccaac
ttagcaagcaccgtgctctcgctcaaggccatgggcatcaatgacctgctgtcctttgac
ttcatggatgccccaccaatggaaaccttgatcacagccatggaacagctatacacattg
ggggccctggatgatgagggcctgcttactcgcctgggccgcaggatggcggaattcccc
ttggagccaatgctgtgcaaaatgctgatcatgtctgtgcatctgggctgcagtgaggaa
atgctgaccattgtgtccatgctctctgtacagaatgtcttctacaggcccaaggataaa
caagccctcgctgatcagaagaaggctaaattccaccagaccgaaggggaccacctcact
ttgctggccgtgtacaattcctggaagaacaacaaattctccaacccctggtgctatgag
aactttatccaggctcgttctctgcgccgggcccaggacattcgtaagcagatgttaggc
ataatggacagacacaagctggatgtggtctcctgtggtaagtccaccgtccgagtgcaa
aaggccatctgcagtggattctttcgaaacgctgccaagaaagacccgcaggagggttac
cggacactgattgaccagcaggtggtctacatccatccttccagtgctctgttcaacaga
cagccggaatgggtggtataccatgagctggtgctgaccacgaaggagtatatgcgtgag
gtcaccaccatcgacccccggtggcttgtggaatttgctccggccttcttcaaggtctct
gacccaaccaagctcagcaaacagaagaagcagcagcgtcttgagcccttgtacaaccgc
tacgaggagcccaacgcctggagaatatcccgggccttccggcggcgctaa
DBGET
integrated database retrieval system
