KEGG   Pteropus alecto (black flying fox): 102885071
Entry
102885071         CDS       T02993                                 
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
pale  Pteropus alecto (black flying fox)
Pathway
pale03030  DNA replication
pale03410  Base excision repair
pale03420  Nucleotide excision repair
pale03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pale00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    102885071 (RFC5)
   03410 Base excision repair
    102885071 (RFC5)
   03420 Nucleotide excision repair
    102885071 (RFC5)
   03430 Mismatch repair
    102885071 (RFC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pale03032]
    102885071 (RFC5)
   03036 Chromosome and associated proteins [BR:pale03036]
    102885071 (RFC5)
   03400 DNA repair and recombination proteins [BR:pale03400]
    102885071 (RFC5)
DNA replication proteins [BR:pale03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    102885071 (RFC5)
  DNA Replication Termination Factors
   ELG1-RFC complex
    102885071 (RFC5)
Chromosome and associated proteins [BR:pale03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    102885071 (RFC5)
DNA repair and recombination proteins [BR:pale03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     102885071 (RFC5)
  Check point factors
   HRAD17(Rad24)-RFC complex
    102885071 (RFC5)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_24 RCF1-5-like_lid AAA_11 AAA_22 AAA_16 RuvB_N DEAD AAA_14 DUF815 ResIII nSTAND_NTPase5 AAA_5 AAA_19 ATPase_2 AAA_30 nSTAND3 TniB PhoH AAA_assoc_2 AAA_7 TIP49 AAA_lid_RFC1 IstB_IS21 bpMoxR Thioredoxin_6 NPHP3_N ABC_tran AAA_3 AAA_28
Other DBs
NCBI-GeneID: 102885071
NCBI-ProteinID: XP_006908657
UniProt: L5KXH6
LinkDB
Position
Unknown
AA seq 345 aa
METSAHKQQQQQPAAAKIRNLPWVEKYRPQALNDLISHQDILSTIQKFISEDRLPHLLLY
GPPGTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGF
KLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTP
ELMVPRLEHVVEEEKVDISEDGMKALVTLSKTLSSGDMRRALNILQSTSMAFGKVTEETV
YTCTGHPLKSDIANILDWMLNQDFTTAYRNIMELKTLKGLALHDILTEIHLFVHRVDFPS
SVRIHLLTKMADIEYRLSVGTSEKIQLSSLIAAFQVTRDLIVTEA
NT seq 1038 nt   +upstreamnt  +downstreamnt
atggaaacctcagcacacaagcagcaacagcagcagcccgcggcggccaagatcaggaac
ctgccctgggttgaaaaataccggccacaggcactgaatgatctcatttctcatcaagac
attttgagtaccattcaaaaattcatcagtgaagaccgactgccacacctgcttctctat
ggccctccagggacaggaaagacatccaccatcctagcctgtgctaaacagctatacaaa
gataaagaatttggctctatggtcttagagctgaatgcttcagacgaccgaggaatagat
atcgttcggggaccaatcctgagctttgctagcacaaggacaatatttaagaaaggcttt
aaactagtgatcctggatgaagctgatgccatgactcaagacgcccagaatgccttgcgg
agagtgattgagaaatttactgaaaataccagattttgcctcatctgtaactatctgtcc
aagatcatccccgccttgcagtcccggtgtacaaggttccgattcggtcccctgactcct
gaactcatggttccccgcctggaacatgttgtagaagaagaaaaagttgatataagtgaa
gacgggatgaaagcacttgtcactctttcaaaaactctttccagtggagatatgcgaagg
gctctgaacattttgcagagcaccagtatggcctttgggaaggtgacagaggagactgtc
tacacctgcacggggcacccgctcaagtcagacatcgccaacattctggactggatgctg
aatcaagacttcaccacagcctacagaaatattatggaattgaaaactctgaaggggttg
gcattacatgatatcctgacagagatacacttgtttgtgcacagagttgactttccatct
tcagttcgaatacatttattgactaaaatggccgacattgagtacagactttctgtgggc
accagtgagaagattcagctgagttccctcattgccgcttttcaagtcacaagagacctg
attgtcacagaggcctag

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