Pteropus alecto (black flying fox): 102885614
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Entry
102885614 CDS
T02993
Symbol
POLR2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1 isoform X1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
pale
Pteropus alecto (black flying fox)
Pathway
pale03020
RNA polymerase
pale03420
Nucleotide excision repair
pale05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
102885614 (POLR2A)
09124 Replication and repair
03420 Nucleotide excision repair
102885614 (POLR2A)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
102885614 (POLR2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pale03021
]
102885614 (POLR2A)
03400 DNA repair and recombination proteins [BR:
pale03400
]
102885614 (POLR2A)
Enzymes [BR:
pale01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
102885614 (POLR2A)
Transcription machinery [BR:
pale03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
102885614 (POLR2A)
DNA repair and recombination proteins [BR:
pale03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
102885614 (POLR2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_R
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
102885614
NCBI-ProteinID:
XP_006922380
LinkDB
All DBs
Position
Unknown
AA seq
1970 aa
AA seq
DB search
MHGGGTPSGDSACPLRTIKRVQFGVLSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDP
RQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVD
SNNPKIKDILAKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPEGDEDLTKEKG
HGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMEP
RYARPEWMIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAA
HVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVD
FSARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYII
RDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWS
TFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQD
TLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHI
NCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYLEM
GHDITRLFYSNIQTVINNWLLIEGHTIGIGDSIADSKTYQDIQNTIKKAKQDVIEVIEKA
HNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKIN
ISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHA
MGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGES
VEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDLVKDVLSNAHIQNELEREFERMR
EDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGVKELSKKL
VIVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAI
AHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLT
VFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMP
DFDVARISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIR
IMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKI
IITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALER
ELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLM
EAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGLGAAGPTG
MFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPG
YSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSP
SYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP
TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS
YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT
SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKY
SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS
PKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEEN
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggggtggcaccccctccggggacagcgcatgcccgctgcgcaccatcaagaga
gtgcagttcggagtcctcagtccggatgaactgaagcgaatgtctgtgacagagggtggt
atcaagtatcctgagacaactgagggtggccgccccaagctcggggggcttatggatccg
aggcagggggtgatcgagcggactggccgctgccaaacatgtgctggaaacatgacagaa
tgtcctggtcactttggccacattgagctggccaaacctgtgtttcatgtgggcttcctg
gtgaagacaatgaaagttttgcgctgtgtctgcttcttctgctccaaattacttgtggac
tctaacaacccaaagatcaaggacattttggctaagtccaaggggcagcccaagaagcgg
ctcacacacgtctatgacctctgcaagggcaaaaacatttgcgagggtggagaggagatg
gacaacaagtttggtgtggagcaacccgagggtgatgaggatttgaccaaagaaaagggc
cacggtggctgtgggcggtaccagcccaggatccggcgctcaggcttagagctgtatgca
gagtggaaacatgtcaatgaggactctcaggagaagaagatcctgctgagtcctgagcga
gtgcatgagatcttcaaacgcatctcagatgaggagtgttttgtgctgggcatggagcca
cgttatgcccggcccgagtggatgattgtcacagtactgcctgtgcctcccctctctgtg
cgccctgctgttgtgatgcagggctctgcccgtaaccaggatgacctgactcacaaactg
gccgacatcgtgaagatcaacaatcagcttcggcgcaatgagcagaatggtgcagcggcc
catgttattgcagaggatgtgaaacttctccagttccatgtagccaccatggtggacaat
gagctgcctggcttgcctcgtgccatgcagaagtctgggcgtcctctcaagtccctgaag
cagaggttgaagggcaaggaaggccgtgtgagagggaatctgatgggcaagcgagtggac
ttctcagcacgcactgtcatcacccccgatcccaacctctccattgaccaggttggcgtg
cctcgctccattgctgccaacatgacgtttgcagagattgtgacccctttcaacattgac
agacttcaggaactagtgcgcagggggaatagccagtacccaggggccaagtacatcatc
cgagacaatggtgatcgcattgacctgcgtttccaccccaaacccagtgaccttcacctg
cagactggctataaggtggaacggcacatgtgtgatggggacattgttattttcaaccgg
cagccaactttgcacaaaatgtccatgatggggcatcgggttcgaatcctcccatggtct
acttttcgcttaaaccttagtgtgacaactccatacaatgccgacttcgatggggatgag
atgaacctgcacctgccacagtctctggagactcgggcagagatccaggagcttgccatg
gtgccacgcatgattgtcaccccccagagtaatcgccctgtcatgggcatcgtgcaagac
acactcacagcagtgcgcaaattcactaagagagacgtcttcctggagcggggtgaagtg
atgaacctcctaatgtttctgtccacatgggatgggaaggtcccacagccagccatcctg
aagccccggcccctgtggacaggcaaacagatcttctccctcattataccaggccacatc
aactgtatccgcacccatagcacccatcctgatgatgaggacagtggcccttacaagcac
atctctcctggggacaccaaggtggtggtggagaatggggagctgatcatgggaatcttg
tgtaagaagtctttgggcacgtcagccggctccttggtccacatctcctacctggagatg
ggtcatgacatcactcgcctcttctactccaacattcagactgtcattaacaactggctt
ctcatcgagggtcataccattggtattggggactccattgctgattctaagacttaccag
gacattcagaatactattaagaaggccaagcaggatgtcattgaggtcatagagaaggct
cataacaatgagctagagcccaccccagggaacactctgcggcagacatttgagaatcag
gtgaaccgcattctcaatgatgcccgagacaagactggctcctcggcccagaaatccttg
tctgaatacaacaactttaagtctatggttgtgtctggagctaaaggttccaagatcaac
atctcccaggtcattgctgtcgttgggcagcagaatgtggagggcaagcggatcccattt
ggattcaaacatcggactctgcctcatttcattaaggatgactatgggcccgagagtcgt
ggctttgtagagaactcctacttggctggcctcacacccaccgaattctttttccatgcc
atggggggtcgtgagggcctcattgacacagctgtcaagactgctgagactgggtacatc
caacggcggctgatcaagtccatggagtcagtgatggtgaagtatgatgcaactgtgcgg
aactctatcaaccaggtggtacagctgcgctacggcgaggatggcttggcaggcgagagc
gttgagttccagaacctggctacccttaagccttccaacaaggcttttgagaagaagttc
cgctttgattataccaatgagagggccctgcggcgcactctgcaggaggatctggtgaag
gatgtactgagcaacgcacacattcagaatgagctggagagagaatttgagcggatgcgt
gaggatcgggaggtgcttagggtcatcttcccaactggcgacagcaaggttgtcctcccc
tgcaacctgttgcgcatgatctggaatgctcagaaaattttccacatcaaccctcgcctt
ccctccgacctgcaccccatcaaggtagtagagggagttaaggaactgagcaagaagctg
gtgatcgtgaatggggatgacccactgagccggcaggctcaggagaatgccacactgctc
ttcaacattcaccttcgatccacactgtgttcccgccgcatggctgaggagtttcggctc
agtggagaggccttcgactggctgcttggagagatcgagtccaagttcaaccaagccatt
gcccatcctggggaaatggtgggcgctctggctgcacagtcccttggagaacctgcaacc
cagatgaccttgaacacctttcactatgctggtgtgtctgctaagaatgtgacattgggt
gtgccccggcttaaggagctcatcaacatttccaagaagccaaagaccccctcacttact
gtcttcctgctgggccagtctgctcgagatgccgagagagccaaggacattctgtgccgc
ctggaacatacaacattgaggaaagtgactgccaacacagctatctactatgacccgaac
ccccagagcacggtggtggcagaggatcaggaatgggtgaatgtctactatgagatgcct
gactttgatgtggcccgaatttccccctggcttttgcgggtggagctggaccggaagcac
atgactgatcggaagctgaccatggagcagattgccgaaaagatcaatgctggttttggc
gatgacttgaattgcatctttaatgatgataatgcagagaagctggtactccgtatccgc
atcatgaacagtgatgaaaacaaaatgcaagaggaagaagaggtggtggataagatggat
gacgacgttttcctgcgctgtattgagtccaacatgctgacagatatgaccctgcagggt
attgagcagatcagcaaggtgtacatgcacttgccacagacagacaacaagaagaagatc
attatcacagaggacggggaattcaaggccctgcaggagtggattctggagacggacggt
gtaagcttgatgcgggtgttgagtgagaaggatgtggaccctgtgcgcactacgtccaat
gacattgtggagatcttcacggtgctgggtattgaagctgtgcggaaggccctggagcgg
gagctttaccatgtcatctcctttgatggttcctatgtcaattaccggcacttggctctc
ttgtgtgatactatgacctgtcgtggccacctgatggccatcacgcgacacggagtcaat
cgccaggatactggacctctcatgaagtgctcctttgaggaaacggtggatgtgcttatg
gaagcagctgcacatggagagagtgaccctatgaagggggtgtctgaaaatatcatgctg
ggccagctagctccagctggcactggctgttttgacctcctgcttgatgcagagaagtgc
aagtatggcatggagatccccaccaatatccccggcttgggggctgctggacccactggc
atgttcttcggttcggcacccagtcccatgggaggaatttctccagccatgacaccttgg
aaccagggtgcaaccccagcctatggcgcctggtcccccagtgttgggagtggaatgacc
ccaggggcagctggcttctctcccagtgctgcttcagatgccagcggcttcagccctggt
tactcccctgcctggtctcccacgccaggctccccaggctccccaggcccctcaagccca
tacatcccctcaccaggtggtgccatgtctcccagctactccccaacatcccctgcctac
gagccccgctcccctgggggctacacaccccagagtccttcctactcccctacttcaccc
tcctactcccctacttctccgtcctattctccaaccagtcccaactatagtcccacgtca
cccagctattcaccaacttctcccagctactctccaacctctcccagctattccccgacc
tctcctagttattctcccacctctcccagctattctccaacttccccaagctactcgccc
acatcacctagctactcaccaacctctcccagctactcgccaacatctcccagctactca
ccaacctctcccagctactcaccaacgtcacccagctattctcccacctcccccagctac
tcaccaacatctcctagctattctccaacatcaccaagctactcaccaacttccccaagt
tactcacccaccagccctaactattctccaaccagtcccaattataccccgacatcaccc
agctatagtccaacatcacccagctactcacctactagtcccaactatacaccgacaagc
cctaactacagcccaacctctccaagctactctccaacttcacccagctactcccccacc
tcaccaagttattccccttcaagcccacgctacacaccacagtctccaacctataccccg
agttctcccagctacagccccagctctcccagctacagccctacctctccaaagtacacc
ccaaccagcccttcctacagtccaagctcaccagagtataccccaacctctcccaagtac
tcacctaccagcccaaaatattctccaacttctcccaagtattctcctaccagccccacc
tattcacccaccacgccgaaatactcaccaacatctcctacttactcaccgacttctccc
gtttacaccccaacctcccccaagtactcacctactagccccacttactcacccacctcc
cccaagtactcacccaccagccccacctactcacccacctcccccaaaggctctacctac
tcgcccacttcccctggatactcgcccactagccccacttatagcctcaccagcccagcc
atcagcccagatgacagtgatgaagagaactga
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integrated database retrieval system
