Pteropus alecto (black flying fox): 102886881
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Entry
102886881 CDS
T02993
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
pale
Pteropus alecto (black flying fox)
Pathway
pale03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102886881 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pale03019
]
102886881 (EXOSC1)
Messenger RNA biogenesis [BR:
pale03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
102886881 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
102886881 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
102886881
NCBI-ProteinID:
XP_006925977
LinkDB
All DBs
Position
Unknown
AA seq
209 aa
AA seq
DB search
MRSRLCFSRRLVAVMAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCMTKSSE
NGALPVVSVMRETESQLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKE
DVRATEKDKVEIYKSFRPGDIVLAKVISLGDAQSNYLLTTGENELGVVVAHSESGVQMVP
ISWCEMQCPKTHTKEFRKVARVQPEFLQT
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgagaagtcggctttgtttttctcggcgtttggtggcagtcatggcgccacccgtgagg
tactgcatccctggcgaacgtctgtgtaacttggaggagggcagcccgggcagcggcacc
tacacccggcacggctacatcttttcgtcgcttgctggctgcatgacgaagagcagcgag
aacggcgcgcttcctgtcgtgtccgtgatgagagaaacagagtcccaattactgccagat
gtgggggcaattgtaacctgtaaggtctctagcatcaattcgcgctttgccaaagtacac
atcctatatgtggggtccacaccacttaagaactcttttcgaggaactattcgcaaggaa
gatgtccgagctactgaaaaagacaaggttgaaatttataagagtttccgcccaggtgac
attgtcttggccaaagtgatctccctaggtgacgcacagtccaactacctcctgaccact
ggtgaaaatgagctaggggtggtggtggcccacagtgaatcaggtgtccagatggttccc
atcagctggtgtgagatgcagtgccctaagacccacactaaagaattccggaaagtggcc
cgagtacagcctgaatttttgcagacctaa
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