Pteropus alecto (black flying fox): 102887035
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Entry
102887035 CDS
T02993
Symbol
PABPC5
Name
(RefSeq) polyadenylate-binding protein 5
KO
K13126
polyadenylate-binding protein
Organism
pale
Pteropus alecto (black flying fox)
Pathway
pale03015
mRNA surveillance pathway
pale03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102887035 (PABPC5)
09123 Folding, sorting and degradation
03018 RNA degradation
102887035 (PABPC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pale03019
]
102887035 (PABPC5)
03041 Spliceosome [BR:
pale03041
]
102887035 (PABPC5)
Messenger RNA biogenesis [BR:
pale03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
102887035 (PABPC5)
mRNA cycle factors
Stress granule specific factors
102887035 (PABPC5)
Spliceosome [BR:
pale03041
]
Complex C
Other components
Complex C specific factors
102887035 (PABPC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RRM_10
RRM_3
TC1
Motif
Other DBs
NCBI-GeneID:
102887035
NCBI-ProteinID:
XP_006903906
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MGSGEPNPAGKKKKYLKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLG
YGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNR
ALFYLFSAFGNILSCKVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRX
XXXXERAAEVRTRDRATFTNVFVKNFGDDMDDEKLKDIFSEYGPTESVKVIRDASGKSKG
FGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPP
GVPVYIKNLDETIDDEKLKEEFSSFGSISRAKVMVEVGQGKGFGVVCYSSFEEATKAVDE
MNGRIMGSKPLHVTLGQARRRW
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggggagtggggagcctaatcctgctggcaagaaaaagaagtacctcaaggctgccttg
tacgtgggtgacttggacccagatgtcaccgaggacatgctatataaaaagttcaggcct
gctggccccctgcgcttcacccgaatctgccgtgacccggtgacccgcagccccctgggc
tatggctatgttaacttccgttttcctgcggatgcagagtgggccctgaataccatgaat
tttgatttgattaatggcaaaccattccgcctcatgtggtctcagccagatgaccgctta
agaaaatctggagtaggaaatatattcatcaaaaacctggacaaatccatagacaatagg
gcccttttttatttattttctgcttttggaaacattctctcttgcaaagtagtatgcgat
gacaatggctctaagggttatgcctatgtgcactttgacagcctggcggctgccaacaga
gccatctggcacatgaatggagtgcggctcaacaatcgccaagtttatgttggccgnnnn
nnnnnnnnnnnagagcgggcagctgaagtcagaaccagggatagagcaactttcaccaac
gtctttgttaaaaactttggagatgacatggatgacgaaaaactgaaggacattttcagt
gaatatgggccaactgagagtgttaaggtaataagagatgccagtgggaaatctaaaggc
tttggatttgtaagatacgagacacacgaggctgcccaaaaggctgtgctagacctgcac
ggaaagtccatcgatgggaaagtcctatatgttggacgagcacagaagaaaattgagcgc
ctggctgagttaaggcgaagatttgaacggctgagattgaaagaaaaaagtcggcctccg
ggggtgcctgtctatattaagaacctggatgagacaatcgatgatgaaaagctgaaggag
gaattttcttcctttggatcaattagccgggctaaagtgatggtggaagtggggcaaggc
aaagggtttggggtcgtctgctactcctcttttgaagaggctaccaaagcagtggatgag
atgaatggtcgcataatgggctccaagcccctgcatgtcaccctggggcaggccaggcgc
cggtggtga
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