Pteropus alecto (black flying fox): 102887872
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Entry
102887872 CDS
T02993
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
pale
Pteropus alecto (black flying fox)
Pathway
pale04613
Neutrophil extracellular trap formation
pale05014
Amyotrophic lateral sclerosis
pale05034
Alcoholism
pale05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
102887872 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
102887872 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102887872 (HDAC6)
09165 Substance dependence
05034 Alcoholism
102887872 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pale01009
]
102887872 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pale03019
]
102887872 (HDAC6)
04131 Membrane trafficking [BR:
pale04131
]
102887872 (HDAC6)
03036 Chromosome and associated proteins [BR:
pale03036
]
102887872 (HDAC6)
Enzymes [BR:
pale01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
102887872 (HDAC6)
Protein phosphatases and associated proteins [BR:
pale01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102887872 (HDAC6)
Messenger RNA biogenesis [BR:
pale03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
102887872 (HDAC6)
Membrane trafficking [BR:
pale04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
102887872 (HDAC6)
Chromosome and associated proteins [BR:
pale03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
102887872 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Zn_ribbon_19
Motif
Other DBs
NCBI-GeneID:
102887872
NCBI-ProteinID:
XP_006922811
UniProt:
L5JWM2
LinkDB
All DBs
Position
Unknown
AA seq
1140 aa
AA seq
DB search
MTSTGQDSTTTKQRSRHNPHSTPHDSNVTSKRGTKKGATLHSSPKLAEVKKKGRMKKLSQ
ATGQDLIVGLQGLDLNVEAKTLSGTGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQ
EGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELRILADTYDSVYLHPNSY
TCACLASGSVLRLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQK
HGIQRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQ
GYTINVPWNQVGMRDADYIAAFLQVLLPVALEFHPQLVLVAAGFDALQGDPKGEMAATPA
GFAQLTHLLMGLAGGRLILSLEGGYNLRSLAEGVSASLHTLLGDPCPMLESPGAPCPSAQ
SSLSCALEALEPFWEVLVRSGETREEDNVERDNAEEEEEEEEEPWQPPELPILTWPVLQA
RTGLVYDQQMMGHYNLWDNHHPEMPQRISQIMCRLEELGLSRRCLILPARPATDAELLTC
HSAEYVGRLRATEKMKPRELHREGANFDSIYICPSTFACAKLAAGSTCCLVEAVLAGEVL
NGVAVVRPPGHHAEQDAACGFCFFNSVAVAARHAQVISGHALRILIVDWDVHHGNGTQHI
FEEDPSILYISLHRYDHGTFFPMGDEGASNQVGWAAGMGFTVNVAWNGPRMGDAEYLAAW
HRVVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLASGRIILILE
GGYNLTSISESMAACTRTLLGDPPPLLTLPRPPLSGALASIAKTIQIHRKYWRSLRVTKF
EDKEGPSSSKLTKEAPQPANPESAERLTTLEGNILDASTEKDTSASSVQESTPAQTKSQT
DVVERTQDQPSEAAKGEPMLDKTTSEAATPDQTTSEAAMLGQTTSEEAAEIAKLIQTPPA
SPVQGATAQISLSKLIGNLRTLELDNKAQEAPESQIPEEERLLGEAAGGQDVDNSVLMQA
FGNTDQVMFYAVTPLPWCPHLVAVCPIPEAGLDVTQPCQDCGALQENWVCLSCYEVYCGR
YISAHMLQHYEVSGHPMVLSYVDLSTWCYQCQAYVHHQALLDVKNVAHQNKFGEDMPHSH
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgacctccactggccaggattccaccacaaccaagcagcggagtaggcacaacccccac
tcgaccccccacgactccaacgtcacctcgaagcgaggtactaagaagggtgccacgctc
cactccagccccaaactagcagaagttaagaagaaaggcagaatgaagaagctcagccag
gcaacagggcaagacctaatcgtggggctgcaagggctggatctgaacgttgaggccaag
acactgtctggtactggcttggtgttagatgagcagctcaatgaattccactgcctctgg
gatgacagcttccctgaaggccccgagcggctccatgccatcaaggaacaactgatccag
gagggcctcctggaccgctgtgtgtcctttcaggcccggtttgctgaaaaggaggagctg
atgttggttcacagcctagaatacattgatctgatggagacaacccaatacatgaatgag
ggagaactccgtatcctagcagacacctatgactcagtttatctgcatccgaactcatac
acctgcgcctgcctggcttcaggctccgtcctcaggctggtggatgcagtcctgggggca
gagatccggaatggcatggccatcatcaggcctcctggacaccacgcccaacacagtctc
atggacgggtattgcatgttcaaccatgtggccgtggctgcccgctacgctcaacagaag
catggcattcagagggtccttatcgtggattgggatgtacaccacggtcagggaacacag
ttcacctttgaccaagaccccagcgtgctctatttctccatccaccgctacgagcagggt
cggttctggccccacctgaaggcctctaactggtccaccacaggttttggccagggacag
ggatacaccatcaatgtgccttggaaccaggtggggatgcgagatgccgactacatcgct
gctttcctgcaagtcctactgccagtcgcccttgagttccacccccagctggtcctggtg
gctgctggatttgatgcccttcaaggggaccccaagggtgagatggctgccactccggca
gggtttgcccagctaacccatctgctcatgggtctggcaggaggcagactgatcctgtct
ctggagggtggctacaacctccgctccctggctgagggcgtcagtgcctcacttcacacc
ctcctgggagacccttgccccatgctggagtcccctggtgccccctgcccaagtgcccag
tcttcactgtcctgcgctctggaagccctggagcccttctgggaagtccttgtgagatca
ggtgagacccgggaggaggacaacgtggagagggacaatgcagaagaggaggaagaggag
gaggaggaaccatggcagccccctgagctcccaatcctgacgtggccagtgctgcaggct
cgcacagggctggtctacgaccaacagatgatgggtcactacaacttgtgggataaccac
caccccgagatgccccagcgcatctcacagatcatgtgccgtctggaggagctgggcctt
tctaggcgctgcctcatcctgcctgcacgtcctgccacagacgctgagctgctcacctgc
cacagtgctgagtatgtgggtcgtctgcgggccacagagaagatgaaaccccgggagctg
caccgcgagggtgccaactttgactccatctacatatgccccagcaccttcgcctgtgcg
aagctggctgccggctccacatgctgccttgtggaggctgtgctggcaggagaggttttg
aatggtgttgctgtggtgcgtcctccgggacaccatgcagaacaggatgctgcctgtggt
ttctgctttttcaactctgtagctgtggctgctcgccatgcccaggtcatcagtgggcat
gctctgcggattttgatcgtggattgggacgtccatcacggtaatggaactcagcatata
tttgaggaggatcccagcatactctacatttccctgcaccgctatgatcatggcaccttc
tttcccatgggggatgagggtgccagcaaccaggtgggctgggccgcgggcatgggcttc
actgtcaatgtggcctggaatgggccccgcatgggtgacgctgagtacctggctgcttgg
catcgtgtggtgcttcccattgcctacgagtttaatccagaactggtgctagtctcagct
ggctttgatgcagcacggggggacccgttggggggctgccaggtatcacctgagggctat
gcccatctcacccacctgctgatgggccttgccagtggccgcattatcctaatcctagag
ggtggctataacctgacatccatctcagagtccatggctgcctgcacccgtaccctcctt
ggggacccgccacccctgctgaccctgccacggcccccactatccggggccctggcctcg
attgctaagaccatccaaatccatcgcaaatactggcgcagcttacgggtcacaaaattc
gaagacaaggagggaccctccagttctaagttgaccaaggaggcaccccaaccagcaaat
cctgagtcagctgagaggctgaccacactagaagggaacattctggatgcaagcacagaa
aaggacacctcagcatcatctgttcaagagtctactccagcccagactaagtcacagacg
gatgtggtagagcgcactcaggaccagccctcagaggcagccaagggggaacccatgctg
gacaagaccacctcagaggcagccacgccagaccagaccacctcagaggcagccatgctg
ggccagaccacctcagaggaggctgcggaaattgccaagctgatccaaacccctccagcc
tcacctgtgcaaggagccacagcccagatatccctaagtaagctgattgggaatctcagg
accttggaactagacaacaaggctcaggaggccccagagtctcagatcccagaagaggag
aggctacttggagaagcagctggaggtcaggacgtggataattcagtgctgatgcaggcc
tttgggaacactgaccaggtcatgttttatgctgtgacaccactgccttggtgtccccat
ttggtggcagtatgccccattcctgaagcaggcctggacgtgacccagccttgccaggac
tgtggagcactccaggagaactgggtgtgtctgtcttgctatgaggtctactgtggtcgt
tacatcagtgcccatatgctacagcactacgaagtctcaggacacccaatggtcctcagc
tatgtcgacctttctacctggtgttaccaatgtcaggcctatgtccaccatcaggctctc
ctagatgtgaagaacgtcgcccaccaaaacaagtttggggaggacatgccccactcacac
taa
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integrated database retrieval system
