Pteropus alecto (black flying fox): 102887896
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Entry
102887896 CDS
T02993
Symbol
TOPBP1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
pale
Pteropus alecto (black flying fox)
Pathway
pale03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102887896 (TOPBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pale03032
]
102887896 (TOPBP1)
03400 DNA repair and recombination proteins [BR:
pale03400
]
102887896 (TOPBP1)
DNA replication proteins [BR:
pale03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
102887896 (TOPBP1)
DNA repair and recombination proteins [BR:
pale03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
102887896 (TOPBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
102887896
NCBI-ProteinID:
XP_006907297
UniProt:
L5L0D4
LinkDB
All DBs
Position
Unknown
AA seq
1521 aa
AA seq
DB search
MSRNDKEPFFVKFLKSSDNSECFLKALESIKEFQSEEYLQVITEEEALEIKENDRSLYIC
DPFSGVAFDHLKELGCRIVGPQVVIFCMHHQRCVPRAEHPVYNMVMCDVTVSCTSLEKDK
REEVHKYVQMMGGRVYRDLNVSVTHLIAGEVGSKKYLVAANLKKPILLPSWIKTLWEKSQ
EKKIARYTDINMEDFKCPIFLGCIICVTGLCGSDRKTVQQLTVKHGGQYMGQLKMNDCTH
LIVQEPKGQKYECAKRWNVHCVTTQWFFDSVEKGFCQDESMYRTEPILETKTVPDTSTPT
GQINTTDGRTLSDVSHISNINASCVNESICNSVLNSKVESTLENLENLDVSAFQAPEDLL
DGCRIYLCGFSGRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDYDDELKQFWDKSAHRP
HVVGAKWLLECFSKGYMLPEEPYVHANYQPVEIPVSDQPESKTALLKKNSSLSKKDFAPN
EKHDQADEDLLSQYVNKNATVVEAMKSEVGTFNDTTHVEPFNDSTHISLQEENQTSVSHC
LPDASTITEEGLFSQKSFLVFGFSNENESNIANIIQENAGKMVSLQSRIVADYAVVPLLG
CEVEATVGDVVTNTWLVACIDYQTLFDPKSNPLFMPVPVMAGMTPLQNCVISFSQCAGAE
KDSLTFLAKHLGASVQEFFVRKYNAKKGMFASTHLILKEPGGSKYEAAKKWNLPAVTIAW
LLETARMGKRANESHFLIENAPKKEQSLETEITNGVNLNPHTPKHPATHLETQKKAVTPL
DMNYFQSKAFRAVVSQHTEQVSSSPAGGQPPQKEPLLHLDTPSKFLCKDKLFKPSFDVKD
ALAALETPGGPSQKERKLSTPLSEVIVRNLKVALANSSRDAVALSASPQLKDVQTEKEEA
PKPLHKVVVYVSKKLSKKQSELNGIAASLGADYRWNFDETVTHFIYQGRQNDTNREYKSV
KERGIHIVSEHWLLECAQEHKHLPESLYPHTYNPKMSLDISAVQDCRPSNSRLPSACATT
KDDEPDHLPVEENDMDNMITDDKELATLNGNGKNDSKGALTQTLEMRENFQKQLQEIMSA
TSIVKPQGQRTSLSKSGCNSASSTPDSTRSARSGRSRVLEALRQSRQTVPDVNTEPSQNE
QIIWDDPTAREERARLASNLQWPSCPTQYSELQVDINRVEDSPFQEPLHDSKTAEQAVCD
PGNICVTEAPKHPISEELETPIKDSHLIPTPQAPSIAFPLANPPVAPHPKEKIITIEETR
EALKKQHVFQLSSLNPQERIDYCHLIEKLGGLVIEKQCFDPNCTHIVVGHPLRNEKYLAS
VAAGKWVLHRSYLEACRTAGCFVPEEDYEWGSSSILDVLTGINVQQRRLALAAMRWRKKI
QQRQESGIVEGAFSGWKVILHVDQSREAGFKRLLQSGGAKVLPGHSVPLFKEATHLFSDF
NKLKPDNSGINIAEAAAQNVYCLKTEYIADYLMQETPPQVENYCLPEAVSVLQNNKEPEP
GLSQKRKAPTEKNKIKRPRVH
NT seq
4566 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaaatgacaaagaaccgttttttgtgaagtttttaaagtcttctgacaattct
gagtgttttcttaaagctcttgagtcaataaaagagttccaatcagaagaatatcttcag
gttattacagaagaagaagcattggagataaaggaaaatgatagatcactttatatctgt
gacccttttagtggcgttgcctttgatcacctcaaagagcttggctgcagaattgttggt
cctcaagtagtcatattttgtatgcaccaccagcgatgtgtcccaagagcagaacatcca
gtttataatatggttatgtgtgatgttactgtatcttgtacgagcctggaaaaagacaaa
agggaagaagttcataaatacgtacaaatgatgggtggacgtgtatacagagatcttaat
gtatcagtaacccaccttattgccggagaagttggtagcaaaaaatatttagtcgctgca
aacctgaagaaacctattttgcttccttcttggataaaaacactttgggagaagtcacaa
gagaaaaaaatagcaagatatactgatataaacatggaagatttcaagtgtcctattttt
ctgggttgcataatctgtgtaactggcttgtgtggctcggacagaaagacagttcagcaa
ctcacagttaagcatggaggtcaatacatgggacaattgaaaatgaatgactgtacacac
ctcattgtgcaagaaccaaaaggtcaaaaatatgaatgtgccaagcgatggaatgtacac
tgtgtgaccacgcagtggttttttgacagtgttgagaaaggtttttgtcaagatgaatcc
atgtataggacagagcctatcctggaaacaaagactgtgcctgatacgtcaactcctact
ggtcagatcaacacaactgatggtcgtactctttcggatgtcagccatatttccaacatt
aatgcaagttgcgtaaatgaatcaatatgtaattcagttcttaatagcaaagtggagtct
acacttgaaaatctagaaaatctggatgtcagtgcatttcaagcacctgaagatttatta
gatggttgtcggatatatctttgtggtttcagtggcagaaaactagataaactgagaagg
cttattaacagtggaggtggagttcgttttaatcagctcaatgaagatgtaactcatgtt
attgtgggagattatgatgatgaattgaagcagttttgggataaatcagcccacaggcct
cacgtagtgggagcaaaatggttgctagagtgttttagtaaaggttatatgcttcctgaa
gagccatatgtccatgctaactaccagccagtggaaattccagtttccgatcaacctgaa
agtaaaacagcccttttaaaaaagaacagcagcctttctaagaaagactttgctcctaat
gaaaagcatgaccaagctgatgaagatctgctctctcaatatgtaaataagaacgcaact
gtagttgaagccatgaagtctgaagttgggacctttaatgatactactcatgttgagcct
tttaatgactccactcatatttctctgcaagaagaaaaccaaacttctgtcagtcattgc
ctccctgacgcttctacgattactgaagaaggtttatttagccaaaagagtttccttgtt
ttcggttttagtaatgaaaatgaatctaatattgcaaatatcatacaggaaaatgctgga
aaaatggtgtcccttcagagcagaattgttgctgattatgctgtggttcctctgctgggg
tgtgaagtagaagcaactgtgggagacgttgttacaaatacatggctggtggcttgtata
gactatcagactttatttgatccgaagtcgaatcctctcttcatgccagtcccagtaatg
gcaggaatgactcctttacagaattgtgttatttcattcagccagtgtgcaggagcagaa
aaagattcgttgacattcttagcaaaacaccttggagcaagcgttcaagaattctttgtt
cgcaaatacaatgcgaagaaaggcatgtttgccagcacacatcttatattgaaagagcca
ggtggttctaaatatgaagctgccaagaagtggaatttaccggctgtcacgatagcttgg
cttttggagactgctagaatgggaaagagagcaaatgagagccattttctgattgaaaat
gcacctaaaaaagagcaaagtttagaaactgaaataacaaatggagtaaatctgaatcca
catactccaaagcatcccgccacccacctggaaactcagaaaaaagccgttacaccttta
gatatgaactactttcagagtaaagctttccgtgctgtggtctcgcagcacacggagcag
gtttcctcctccccagctggaggacagccaccccagaaggagcccttgttacacctggac
acaccatcaaaatttctgtgcaaggacaaactcttcaagccttcctttgatgtgaaggat
gcactggcagccttggaaactccaggaggtcccagccaaaaggaaaggaaactgagtaca
ccgctctccgaagtcattgtcagaaacttgaaagttgctttggcaaatagctctcgagat
gctgttgctctttctgccagccctcaactgaaggatgtccaaacagagaaggaagaagct
ccaaagccgcttcacaaggtagtggtatatgttagtaaaaaactcagtaagaagcagagt
gaactaaatggaattgcagcctctctaggagcagattacagatggaatttcgatgaaaca
gtgactcattttatctatcaagggcgacagaatgacactaatcgagaatataaatctgta
aaagaaagaggaatacacattgtttccgagcactggcttttagaatgtgcccaagagcat
aaacatcttcctgaatctctttatccacatacgtataatcccaaaatgagcttggatatc
agtgcagtacaagattgcagaccctctaatagtcgactgccctcagcttgtgcgacaaca
aaggatgatgagccagatcatttgcctgtagaagaaaatgatatggataatatgatcact
gatgataaagaattagcaacattaaatggaaatggaaagaatgactctaaaggagctctg
acacagaccttggaaatgagagagaatttccaaaagcagctgcaggagataatgtctgca
acatcgatagtgaaaccccaagggcagaggacttccctttcaaaaagtggttgtaacagt
gcttcttcaacccctgacagcacccgctctgcccgcagtggacgaagtagagtcctagag
gcactgaggcagtctcgtcaaacagtacctgatgtcaacacagagccctcccaaaatgaa
cagatcatttgggatgaccctacagccagagaggagagagcgaggcttgccagcaatttg
cagtggcctagctgtcccacacaatactctgaacttcaggttgacattaacagagtggaa
gattctcctttccaggagcctttacatgattcaaaaactgctgaacaggctgtctgtgat
cctggaaacatatgtgtgactgaggccccaaaacacccgatctctgaagaactggaaact
ccaataaaagacagccacctgatccctacaccgcaagcccccagtattgccttcccccta
gccaacccacctgtggctccacaccctaaagaaaagattataacaatagaggagactcgt
gaagccttaaaaaaacaacacgtatttcagttgtcatctctgaatcctcaagaacgtatt
gattattgtcatctgattgaaaaactaggtgggttagtgatagagaagcagtgctttgat
cctaactgtacgcacattgttgtgggacatccacttcgaaatgagaagtatttagcctca
gtggcagctgggaagtgggtgcttcatcgctcctaccttgaagcgtgcaggactgctggg
tgctttgtgccggaagaagactatgaatggggaagtagttccatacttgatgttttgact
ggaatcaacgtgcagcaacgaagactagcacttgcagcaatgagatggagaaaaaaaatc
cagcaaagacaggaatcaggcattgttgagggggcatttagtgggtggaaggttatctta
catgttgaccagtcccgagaagcaggattcaaacgccttcttcagtctggaggagcaaag
gtactacctggtcattctgtacctttatttaaagaagctacacatctcttttctgacttt
aataaactgaaaccagataactcaggaattaatatagcagaagctgctgcccagaacgtg
tactgcttgaaaacagaatacattgccgattaccttatgcaggaaactcctcctcaagta
gaaaattattgtctaccagaagctgtttcagttcttcagaataataaggaacctgagcct
ggattatcacaaaagaggaaagctcctacagagaaaaacaaaatcaaacgacctagagta
cactaa
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integrated database retrieval system
