Pteropus alecto (black flying fox): 102887924
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Entry
102887924 CDS
T02993
Symbol
PCDH9
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-9
KO
K16498
protocadherin delta 1
Organism
pale
Pteropus alecto (black flying fox)
Pathway
pale03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
102887924 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pale01009
]
102887924 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pale04515
]
102887924 (PCDH9)
Protein phosphatases and associated proteins [BR:
pale01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102887924 (PCDH9)
Cell adhesion molecules [BR:
pale04515
]
Cadherins
Protocadherins
102887924 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
MAP17
Big_9
RCR
V_ATPase_I
EphA2_TM
DUF6249
7tm_3
DUF6377
Motif
Other DBs
NCBI-GeneID:
102887924
NCBI-ProteinID:
XP_015446363
LinkDB
All DBs
Position
Unknown
AA seq
1237 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNDNFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAK
VTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGPAPPTTFKPNSPDLAKHYKSASPQPAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSXXXXDHFSASECSSQGGFKTKGPLHTRQCNSHSKSD
NIPVTPQKCPSSAGFYIQENEESHYESQRRVTFHLPDGSQESCSDSGLGDHEPVGSGTLI
SHPLPLVQPQDEFYDQASPDKRTEADGNSDPNSDGPLGPRGLAEATEMCTQECLVLGHSD
NCWMPPGLGPYQHPKSPLSTFAPQKEWVKKDKLVNGHTLTRAWKEDTSRNQFNDRKQYGS
NEGHFNNGSHMTDIPLANLKSYKQTGGAIESPKEHQL
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggctgctctgattgcctgtttaaggctggattcc
gcaatagctcaagaacttatttacactattagagaggaattgcctgaaaatgtgcccata
ggaaacataccaaaggatctgaacatttctcacatcaatgctgccacagggaccagtgcc
agccttgtctacagactggtttctaaagctggggatgcccctttggtgaaagtatccagt
agcactggggaaattttcacaacctccaatagaatagacagagaaaaactctgtgctgga
gcctcttatgctgaggagaatgagtgtttctttgaacttgaggtggtgatcctccccaat
gattttttcaggctgatcaaaataaaaataattgtcaaggataccaatgataatgccccc
atgtttccatctcctgtcatcaatatttccattccagaaaacactttgatcaacagccgc
tttccaattccatcagcaacagatcctgacacaggcttcaatggtgtacagcattatgaa
ttgttaaatgggcagagtgtttttggactggatatcgtggaaactccggagggagagaag
tggccgcaattgattgttcagcaaaacttggacagagaacagaaagatacctatgtgatg
aaaatcaaagtagaggatggaggcactccacagaaatccagcacagccatactgcaggtc
acagtaagtgatgtaaatgacaacaggccagtgtttaaggagggtcaggtggaggtccac
attccagagaatgctcctgtgggcacctctgtaattcagctccatgccactgatgcagac
ataggcagtaatgctgaaatccggtacatttttggtgcccaggttgcccctgctaccaaa
agactctttgctttaaataatactactgggctgattacagttcagaggtccttagatcga
gaggagacagccattcacaaagtgacagtgctggccagtgatggcagctccactcccgct
cgagcaaccgtgaccatcaatgtcactgatgtaaatgataaccctcctaacatagacctc
aggtacattataagtcccatcaacggcacagtgtatttatctgagaaagatcctgtcaat
accaagattgccctaattacagtttcagataaggacacagatgtgaatggcaaagtgatc
tgttttattgaaagagaggtcccatttcatttgaaggcagtatacgacaaccaatatttg
ttagagacctcctctttgttggactacgagggcaccaaagaattcagctttaaaattgtt
gcctccgattctggcaagcccagtttaaatcagactgccctggtaagggttaagcttgag
gacgaaaatgacaacccaccaattttcaaccagcctgtaattgagctgtcagtttctgaa
aacaaccgacgtgggttatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagatattgtttatcagcttggaccgaatgcctccttctttgatctggaccgaaag
acaggagttttgacagcctccagagtctttgacagagaggaacaagaacgattcattttt
acagtaactgccagggacaatgggacccctcccctccaaagccaagcggctgtgatagtt
actgttctggatgagaatgacaatagccccaagtttactcataatcatttccaatttttt
gtgtctgagaatctgccaaagtatagtactgtgggggtaatcacagtgacagatgcagat
gctggcgagaataaagctgtgactctttccattctaaacgacaatgataattttgtgttg
gatccctattctggagtcataaagtcaaacgtctcattcgacagagagcagcagagttcc
tatacttttgatgtcaaagccaccgacgggggacaaccaccacgctcctctactgcaaaa
gtcaccatcaatgtcatggatgtcaatgacaacagcccagttgtcatttctccaccttct
aacacttcttttaagttggtgcccctctcagccattcccggctccgtggtcgcagaggtt
ttcgcagtggatattgacactgggatgaatgctgagctgaagtacaccatcgtgagtggg
aacaacaaaggcttgtttcggattgatccagtcacaggcaacattactttggaagaaaaa
ccggcacctaccgatgtgggcttgcaccgtttggtggtcaacataagcgacctggggtac
cctaagtctctgcacacactcgtgctcgtttttctttacgttaacgatactgccgggaat
gcctcctacatctatgacttgatccgcaggactatggagaccccgttggacaggaacata
ggggacagtagccagccctatcaaaacgaggactatctcaccatcatgatcgccatcgtc
gcaggtgccatggtggtcatagtcgtgatcttcgtcacggttctggtgcgctgtcgccat
gcatcaaggttcaaagcagctcagaggagcaagcaaggggctgaatggatgtccccaaac
caggagaacaaacaaaataagaaaaagaaaagaaagaaaagaaagtctcccaagagctct
cttttgaactttgtgacaattgaagagtccaaacccgatgacgcagttcacgaacctatc
aatgggacaataagcctgccagctgagctggaggagcaaagtataggaagatttgactgg
ggtccggcacctccaaccaccttcaagcccaacagccctgacctggccaagcactacaaa
tctgcttctccacagcctgcttttcatcttaaaccagacactccagtttccgtgaaaaag
catcatgtgattcaggaactccctttggacaacacctttgtcgggggttgtgacaccctt
tccaaacgctctnnnnnnnnnncagatcacttcagtgcctcagagtgcagttcccaagga
ggcttcaagacaaagggccccttacacaccagacagtgtaactcacacagcaaaagtgac
aatattcctgtcactcctcagaaatgtcccagctctgcgggtttctacattcaggagaat
gaagaaagccattatgagtcgcagcgccgtgttacctttcacctccctgatggctcccag
gaaagctgcagtgacagtggtctaggagaccacgaaccggtgggtagtggaaccctgatc
tcacaccctcttcctctggttcagccacaggacgaattctacgaccaagcctctccggac
aagaggaccgaagcggacggcaactctgaccccaactcggatgggcctctgggcccccga
ggattagctgaagccacagagatgtgcactcaagagtgcttggttttgggtcactctgat
aattgctggatgcctcctggcttgggtccatatcaacaccctaaatctcctctctcaacc
tttgcaccccagaaagaatgggtcaagaaggacaagcttgtgaatgggcacactctgacc
agagcctggaaggaagacaccagcaggaaccagttcaatgaccgtaagcagtatggctcc
aatgaaggccatttcaacaatggcagccacatgacagacattcctctggccaatctgaaa
tcttacaagcaaacaggaggtgccattgagagtcctaaggagcaccaactctaa
DBGET
integrated database retrieval system
