Pteropus alecto (black flying fox): 102888664
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Entry
102888664 CDS
T02993
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
pale
Pteropus alecto (black flying fox)
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pale03036
]
102888664 (CHD5)
Chromosome and associated proteins [BR:
pale03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102888664 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
102888664
NCBI-ProteinID:
XP_024904305
LinkDB
All DBs
Position
Unknown
AA seq
1938 aa
AA seq
DB search
MSSPLPFGAEEEDGGLEGFDDFFPEEPMSLPKKKKSKKLKDSRSKGKRKKKEGSHDELSE
NEEDLEEKSESEGSDYSPNKKKKKKLKDKKEKRAKRKKKGDNDEDDNDDACLKEPKSSGQ
LMAEWGLDDVDYLFSEADYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFS
ANNPFKGSSAAAAAAAVAAAVETVTIAPPLAISPQQAPQPVPIRKAKTKEGKGPGVRKKI
RGSKDAKKKGKGRKVAGLKFRLGGVSGKRKKGSSSEEDEREESDLDSASIHSSSVRSECS
AALGKKSKRRRKKKRLDDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEK
APEGKWSCPHCEKEGVQWEPKEDEEEEDEAGCEEEEDDHMEFCRVCKDGGELLCCDACPS
SYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEPPAPFMVGLSGPDMEPS
VPPPKPLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPPFDY
GSGDEDSKSEKRKSKDPLYAKMEERFYRYGIKPEWMTIHRILNHSFDKKGDVHYLIKWKD
LPYDQCTWEIDDIDIPYYDNLKQAYWGHRELMLGEDARLPKRLIKKSKKLKDDKQEKPPD
TPVVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTI
VFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFS
FEDNAVRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQ
SKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQ
IKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGG
GNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKL
RDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCF
LLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEE
RITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGMVSQGQRPI
TPIPDVQSSRGGALAASMKKKHGSTPPGDNKDVEDSSVIHYDDAAISKLLDRNQDATDDT
ELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLA
RNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQS
RRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDL
RGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQE
FEHVNGKYSTPDLIPEGPEGKKPGEAVSSDPTTPVPASPAHLLPAPLGLPDKMEAQLGYM
DEKELGVQKPKKAPEIQALPTALDRVEGEDKHESPEGKERAREERLEETEKAQPSPEQLL
KEEVLPEKEKILDKLELSLIHGRGDDSDFRPDDTKAEEKEPIETQQNGDKDDDEEGKKED
KNGKFKFMFNIADGGFTELHTLWQNEERAAVSSGKIYDIWHRRHDYWLLAGIVTHGYARW
QDIQNDPRYMILNEPFKSEVHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQ
DPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVT
RLPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTIQQGAFGSSQMYNNNFGPNFRGPGP
GGIVNYNQMPLGPYVTDI
NT seq
5817 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagccctctcccctttggagctgaagaagaagatggtggccttgaaggcttcgat
gacttcttccctgaggagcccatgagccttcccaagaagaagaaatccaagaagctcaag
gacagcaggtccaaggggaagcggaagaagaaagaggggagccatgatgagctgtcagaa
aacgaagaggatctggaagagaagtcggagagcgagggcagcgactactcccctaacaaa
aagaagaagaagaaactcaaggacaagaaggaaaaaagagccaagcggaaaaagaagggt
gacaatgatgaggatgacaatgacgacgcatgcctaaaggagcccaagtcctcggggcag
ctcatggccgagtggggcctggacgacgtggactatctgttctcggaggccgactaccac
acgctgaccaactacaaggccttcagccagttcctcaggccactcattgccaagaagaac
ccgaagatccccatgtccaaaatgatgaccgtcctgggtgccaagtggcgggagttcagc
gccaacaaccccttcaagggcagctcggcggctgcagctgcagcggcagtggctgcagcc
gtggagacggtcaccatcgcccccccgctggccattagtccccagcaggcgccccagcct
gtgcccatccgcaaggccaagaccaaggagggcaaggggcctggggtcaggaagaagatc
agaggctccaaggacgccaagaagaagggcaagggcagaaaggtggccggactcaagttc
cgcctcggaggggtcagcggcaagaggaagaagggctcctcgagcgaggaggacgagcgg
gaggagtcggacttggacagcgccagcatccacagctcctccgtgcgctccgagtgctct
gcggccctggggaagaagagcaagaggaggcgcaagaagaagaggctcgatgacggtgac
ggctatgagacggaccaccaggactactgcgaggtgtgccagcagggcggggagatcatc
ctatgtgacacctgcccgcgggcctaccacctcgtctgcctggacccagagctggagaag
gctcccgagggcaagtggagctgtccccactgtgagaaggagggggtccagtgggagccc
aaggaggacgaggaggaggaggacgaggcgggctgcgaggaggaggaggacgaccacatg
gagttctgccgcgtgtgcaaggacgggggcgagctgctctgctgcgacgcttgcccctcc
tcctaccacctgcactgcctcaacccgccgctgcccgagatcccaaacggtgaatggctc
tgcccgcgctgtacttgtcccccactgaagggcaaagtccagcggatcctacactggagg
tggacggagccccctgcccccttcatggtggggctgtcggggcccgacatggagcccagc
gtccccccacccaagcccctggagggcatcccagagagagagttcttcgtgaagtgggct
gggctctcctactggcactgctcctgggtgaaggagctgcagctggagctgtaccacaca
gtgatgtatcggaactaccaaagaaagaacgacatggacgagccaccgccctttgattac
ggctctggtgacgaagacagtaagagcgagaagaggaagagcaaggaccctctctacgcc
aagatggaggagcgcttctatcgctatggcatcaagcccgagtggatgacgatccaccgc
atcctgaaccacagcttcgacaaaaagggggacgtgcactacctgatcaagtggaaagac
ctgccctacgaccagtgcacctgggagattgacgacattgacatcccctactatgacaac
ctgaagcaagcctactggggccacagggagctgatgctgggagaagatgcccggctgccc
aagaggctgatcaagaagagcaagaagctcaaggatgataaacaggagaagccgccggac
acgcctgtcgtggatcccaccgtcaagtttgacaagcagccgtggtacatagacgccacg
ggcggcactctgcacccgtaccagctggagggcctcaactggctgcgcttctcctgggcc
cagggcaccgacaccatcctggccgacgagatggggctgggcaagacggtgcagaccatc
gtcttcctctactccctgtacaaggagggccactccaaagggccctacctggtcagcgcg
cccctgtccaccatcattaactgggagcgcgagtttgagatgtgggcacctgacttctac
gtggtcacctacacgggggacaaggagagccgctccgtgatccgggagaatgagttctcc
tttgaggacaatgctgtccgcagcgggaagaaggtgttccgcatgaagaaagaagtgcag
atcaaattccatgtcctgctcacgtcctacgagctcatcaccatcgaccaagccatcctg
ggctccatcgagtgggcctgcctagtggtggacgaggcccatcgcctcaagaacaatcag
tccaagttctttagagtcttgaacagctacaagatcgattacaagctgctgctgacgggg
accccgcttcagaacaacctggaggagctgttccatctcctcaacttcctgactccagag
cgtttcaacaacctggagggcttcctggaggagtttgccgatatctccaaagaagaccag
atcaagaagctgcatgacctgctggggccccacatgctgaggcggctcaaggcagacgtg
ttcaagaacatgccggccaagaccgagctgatcgtccgtgtggagctgagtcagatgcag
aagaagtactacaagttcatcctcacgcggaactttgaggcgctgaactccaagggcggc
gggaaccaggtgtcgctgctgaacatcatgatggacctgaagaagtgctgcaaccatccc
tacctcttcccggtggctgctgtggaggcccccgtcttgcccaatggctcctacgatggc
agctccctagtcaagtcgtcagggaagctcatgctgctacagaagatgctcaagaaactg
cgggatgaagggcaccgtgtgctcatcttctcccagatgaccaagatgctggacctcctg
gaggacttcctggagtatgagggttacaagtatgagcggatcgatggtggcatcacagga
ggcctccggcaggaggcgatcgacagattcaacgcccctggggcccagcagttctgcttc
cttctctcgacccgggcgggtggcctgggcatcaacctggccacggcagacacggtcatc
atctacgactcggactggaacccgcacaatgacatccaggccttcagccgagcccaccgc
atcgggcagaacaagaaggtgatgatctaccgcttcgtgacgcgtgcctcggtggaggag
cgcatcacacaggtggccaagcgcaagatgatgctcacccacctggtggtgcggcccggc
ctcggctccaagtcgggctccatgaccaagcaggaactggacgacatcctcaagttcggc
acggaggagctcttcaaggatgacgtggagggcatggtgtctcagggccagaggcccatc
acgcccatccccgatgtccagtcctccagagggggagccctggctgccagcatgaagaag
aagcatggcagcaccccgccaggtgacaacaaggacgtggaggacagcagtgtgatccac
tacgacgacgcggccatctccaagctgctggaccggaaccaggacgccacggacgacacg
gagctgcagaacatgaacgagtacctgagctccttcaaggtggcgcagtacgtggtgcgc
gaggaggacggcgtggaggaggtggagcgggagatcatcaagcaggaggagaacgtggac
cccgactactgggagaagctgctccggcaccactacgagcagcagcaggaggacctggcc
cggaacctgggcaagggcaagcgcatccgcaagcaagtcaactacaacgacgcgtcccaa
gaggaccaggagtggcaggacgagctctcggacaaccagtctgaatattccattggctct
gaggatgaggacgaggactttgaagaaaggccggaagggcagagtggtcggcgacagtcc
aggaggcagctgaagagcgacagggacaagcccctgccacctcttcttgcccgcgtcgga
ggcaatatcgaggtgctgggcttcaacgcccgccagcggaaggccttcctgaacgccatc
atgcgctggggcatgcccccccaggacgccttcaactcccactggctggtgcgggacctt
cgcggaaagagcgagaaggagtttagagcctatgtgtccctcttcatgcggcacctgtgt
gagccgggggctgacggcgcggagacctttgcggatggcgtgccccgcgagggtctctcg
aggcagcacgtgctcacgcgcatcggcgtcatgtcgctggttcggaagaaggttcaggag
tttgagcacgtcaatgggaagtacagcaccccagacctgatccccgaggggcccgagggc
aagaagccgggcgaggccgtctcctcagatcccaccacgccagtgcctgccagccccgct
cacctgctgcccgccccgctgggcctgccagacaaaatggaagcccagctgggctacatg
gatgagaaggagctgggggtgcagaagccaaagaaagccccagaaatccaggccctgccg
actgccctggacagagtggagggtgaggacaagcacgagagcccagaaggcaaggagaga
gcccgagaggagcgactggaggagacggagaaggcccagccctccccggagcagctgctg
aaagaggaagtgcttcctgagaaggagaaaattctggacaagctggagctaagcttgatt
cacggcagaggggatgacagcgacttcaggccagatgacaccaaagctgaggagaaggag
cccatcgaaacacagcaaaacggtgacaaagacgacgacgaggaggggaagaaggaagac
aagaatgggaagttcaaattcatgttcaacattgcagatggcggcttcacagagctgcac
acactgtggcagaatgaggaacgtgctgctgtgtcctcggggaaaatctacgacatctgg
caccggcgccatgactactggctgctggcgggcatcgtgacgcacggctacgcccgctgg
caggacatccagaacgacccgaggtacatgatcctcaacgagcccttcaagtctgaggtt
cacaagggcaactacctggagatgaagaacaaattcctggcccgcaggttcaagctgctg
gagcaggcgctggtcattgaggagcagctccggagggccgcgtacctcaacatgacccag
gaccccaaccacccagccatggccctcaacgcccgcctggctgaggtggagtgccttgcc
gagagccaccagcacctgtccaaggagtccctcgctgggaataagcctgccaatgctgtc
ctgcataaggtcttgaaccagctggaggagctgctgagtgacatgaaggcggacgtgacg
cgcctgccctccatgctgtcccgcatccccccggtggccgcccgcctccagatgtccgag
cgcagcatcctgagccgcctgaccaaccgagcgggcgaccccaccatccagcagggcgct
ttcggctcctcccagatgtacaacaacaactttgggcccaacttccggggccctggaccg
ggagggattgtcaactacaaccagatgcccctggggccctatgtgaccgacatctag
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integrated database retrieval system
