Pteropus alecto (black flying fox): 102888688
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Entry
102888688 CDS
T02993
Symbol
IFIH1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
pale
Pteropus alecto (black flying fox)
Pathway
pale04622
RIG-I-like receptor signaling pathway
pale05161
Hepatitis B
pale05162
Measles
pale05164
Influenza A
pale05168
Herpes simplex virus 1 infection
pale05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
102888688 (IFIH1)
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
102888688 (IFIH1)
05171 Coronavirus disease - COVID-19
102888688 (IFIH1)
05164 Influenza A
102888688 (IFIH1)
05162 Measles
102888688 (IFIH1)
05168 Herpes simplex virus 1 infection
102888688 (IFIH1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pale04054
]
102888688 (IFIH1)
Enzymes [BR:
pale01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102888688 (IFIH1)
Pattern recognition receptors [BR:
pale04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
102888688 (IFIH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARD_2
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
CARD
SWI2_SNF2
Cas3-like_C_2
DUF3638
nSTAND3
Motif
Other DBs
NCBI-GeneID:
102888688
NCBI-ProteinID:
NP_001277104
UniProt:
G9F998
LinkDB
All DBs
AA seq
1024 aa
AA seq
DB search
MSNEYSADKRFRYLISCFRARVKMYIQVEPVLDYLTFLSADMKEQIQRTATTMGNINAAE
QLLSTLEKGVWSPGWTRVFVEALQRAGSPLAARYVNPELTDLPSPSFENAHDECLQLLNL
LQPTLVDKLLVRDVLDECLEEELLTIEDRNRIAAAENSGNEAGVRELLRRIVQKENWFST
FLTVLKQTGSDALVRELTGDSASEGNADTENVLREDGPEVKEPLLLATDQPSPEKQGRDT
ESSLESSFVDSSVASESDTSLAEGSVSCLDESLGHNSNMGSDSGTMGSDSDEEEVAKRAS
PEPELNLRPYQMEVAQPALEGKNVIICLPTGSGKTRVAVKIAKDHLDKKKRASEPGKVIV
LVNKVPLVEQLFRKEFQPFLKKWYNVMGLSGDTQLKISFPKVVKSHDVIISTAQILENSL
LNSEKGEDDGVQLSDFSLIVIDECHHTNKEAVYNNIMRRYLKQKLRNNKLKKENKPVIPL
PQILGLTASPGVGGANKQAKAEEHILKICANLDAFTIKTVKENIDQLKDQIKEPCKKFAI
ADDTREDPFKDKLLEIMTKIQTFCQMNPMPDFGTQPYEQWTIQMEKKAAREGNRKDRLCA
EHLRKYNEALQINDTIRMIDAYNHLETFYNDEKEKKFAVLEDDSDDSGDDGGDGDENEDN
EKKPLKLYETDRFLISLFFDNKKILKKLAENPEHENEKLTKLRNTIMEQYTRTAEAARGI
IFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGHSSEFKPMTQNEQKEVISKFRTGK
ISLLIATTVAEEGLDIKECNIIIRYGLVTNEIAMIQARGRARADESTYVLVACSGSGVVD
RETVNDFRVKMMYKAIARVQNMKPEEYAHKILELQMQSIMEKKMKIKRSIAKHYKENPSL
ISFLCKNCSVVACSGDYIHVIEKMHHVNMTQEFKELYIMRENKALKKKFADYQTNGEIIC
KNCGQAWGTMMVHKGLDLPCLKIKNFVVVFKNNSTKKQYKKWVELPITFPDLDYSEYCLF
SDED
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatgagtattctgcagacaagaggttccgatatctcatctcgtgcttccgggcc
agagtgaaaatgtacatccaggtggagcctgtactggactacctaacttttttgtctgca
gacatgaaggagcagatacagaggacggccaccaccatggggaacattaacgcagctgaa
cagctcctgagcaccttggagaagggagtctggtccccgggctggactagggtgtttgta
gaggccctccagcgagcaggcagccccttagctgcccgctacgtgaaccctgagctcaca
gacttgccttctccatcctttgagaacgctcatgatgagtgtctccaactactgaacctc
cttcagcccaccctggtggacaagcttctggttagagatgtcttggatgaatgtctggag
gaggaactgttgacaattgaagacagaaatcggattgctgctgcagaaaatagtggaaat
gaagcaggtgtaagagagctactgagaaggatcgtgcagaaagaaaactggttttctaca
tttctgactgtcctgaagcaaacaggaagtgatgcacttgtccgggagttaactggcgac
agtgcctcggagggcaatgcagacactgagaatgtattacgagaagatggacctgaggtt
aaagagccacttcttttagccacagatcagccaagtccagagaaacagggtcgggacacg
gagagttcgttggaatcatcttttgtggattcttctgtagcttcagaatcagacacaagt
ttggcagaaggaagtgtcagctgcttagatgaaagtcttggacataacagcaacatgggc
agtgattcaggcaccatgggaagtgattcagacgaagaggaagtggcaaaaagagcatcc
cctgagccagaactgaacctcaggccttaccaaatggaagttgcccaaccagccttggag
ggaaagaatgtcattatatgcctccccacagggagtggaaaaaccagagtagccgttaag
attgccaaggatcacttggacaagaagaaaagagcatctgaaccaggaaaagttatagtc
cttgtcaataaggtaccattagttgaacagctcttccgcaaagagtttcaaccatttttg
aagaaatggtataatgtcatgggattaagtggtgatactcaattgaaaatatcatttcca
aaagttgtcaaatcccatgatgttattatcagtacagctcaaatccttgaaaactccctt
ttaaactcagaaaaaggagaagatgatggtgtccagttgtcagacttttctctcatcgtc
attgatgaatgccaccacaccaataaagaagcagtctataataacatcatgaggcgttat
ttgaaacagaagttgagaaataataagctcaagaaagaaaataaaccagtaattccccta
cctcagatactgggattaacagcttcaccaggtgttggaggcgccaacaagcaagccaaa
gctgaagaacacattttaaaaatatgtgccaatcttgatgcatttactattaaaactgtg
aaagaaaacatcgatcaactcaaagaccaaataaaggagccatgcaaaaagtttgcaatc
gcagatgacaccagagaagatccatttaaagacaaacttctggaaataatgacaaagatt
cagaccttttgccaaatgaatccaatgcctgattttggaactcaaccctatgaacaatgg
accattcaaatggaaaaaaaagctgcaagagaaggaaatcgcaaagaccgtctttgtgca
gaacatttgaggaagtacaatgaggctctacaaattaatgacacaattcgaatgattgat
gcatataatcaccttgaaactttttataatgatgaaaaagaaaagaagtttgcagtccta
gaagatgatagtgatgatagtggtgatgatggtggtgatggtgatgaaaatgaagataat
gaaaagaaacctttgaaattgtatgagacagatagatttctcattagtttattttttgat
aacaagaaaatattgaaaaagctggctgaaaacccagaacatgaaaatgaaaagctgacc
aaattaagaaacaccataatggaacaatatacaagaactgcggaagcagcaaggggaata
attttcacaaaaacacgacagagtgcatacgccctttctcagtggattactgaaaatgaa
aaatttgcagaagtaggagtcaaagcccaccatctgattggagctggacacagcagtgag
ttcaagcccatgacacagaatgaacaaaaagaagtcattagtaaatttcgcacaggaaaa
ataagtctgcttatcgctaccacagtggcagaagaaggtctggatattaaagagtgtaat
atcattattcgctatggtctcgtcactaatgaaatagccatgatccaggcccgtggtcga
gccagagctgatgagagcacctacgtcctggttgcctgcagtggctcaggagtggttgac
cgtgagacagttaatgatttccgagtgaaaatgatgtataaagctatagcccgtgttcaa
aatatgaaaccagaggagtatgctcacaagattttggaattacagatgcaaagtataatg
gaaaagaaaatgaaaatcaaaagaagtattgcaaagcattacaaggaaaacccatcatta
ataagtttcctctgcaaaaattgcagtgtggttgcctgctctggagactatatccatgta
attgagaagatgcatcatgttaatatgacacaggaattcaaggaactctacattatgaga
gaaaacaaagcactgaaaaagaagtttgcagactatcaaacaaatggtgagatcatctgc
aaaaactgtggccaagcttggggaacaatgatggttcacaaaggcttagatttgccttgt
ctcaaaataaaaaattttgtggtggtcttcaaaaataattcaacaaagaaacagtacaaa
aagtgggtagaattacctatcacattccctgatcttgactattcagaatattgtttgttt
agtgatgaagattga
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