Pteropus alecto (black flying fox): 102888877
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Entry
102888877 CDS
T02993
Symbol
RXRB
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X1
KO
K08525
retinoid X receptor beta
Organism
pale
Pteropus alecto (black flying fox)
Pathway
pale03320
PPAR signaling pathway
pale04659
Th17 cell differentiation
pale04919
Thyroid hormone signaling pathway
pale04920
Adipocytokine signaling pathway
pale04928
Parathyroid hormone synthesis, secretion and action
pale05200
Pathways in cancer
pale05202
Transcriptional misregulation in cancer
pale05207
Chemical carcinogenesis - receptor activation
pale05216
Thyroid cancer
pale05222
Small cell lung cancer
pale05223
Non-small cell lung cancer
pale05226
Gastric cancer
pale05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
102888877 (RXRB)
09152 Endocrine system
04920 Adipocytokine signaling pathway
102888877 (RXRB)
03320 PPAR signaling pathway
102888877 (RXRB)
04919 Thyroid hormone signaling pathway
102888877 (RXRB)
04928 Parathyroid hormone synthesis, secretion and action
102888877 (RXRB)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102888877 (RXRB)
05202 Transcriptional misregulation in cancer
102888877 (RXRB)
05207 Chemical carcinogenesis - receptor activation
102888877 (RXRB)
09162 Cancer: specific types
05226 Gastric cancer
102888877 (RXRB)
05216 Thyroid cancer
102888877 (RXRB)
05222 Small cell lung cancer
102888877 (RXRB)
05223 Non-small cell lung cancer
102888877 (RXRB)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
102888877 (RXRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pale03000
]
102888877 (RXRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pale03310
]
102888877 (RXRB)
Transcription factors [BR:
pale03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
102888877 (RXRB)
Nuclear receptors [BR:
pale03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
102888877 (RXRB)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
102888877
NCBI-ProteinID:
XP_006907450
LinkDB
All DBs
Position
Unknown
AA seq
535 aa
AA seq
DB search
MSWAARPPFLPQRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAATAAAAAAGEQQTP
EPEPGEAGRDGMGDSGRDSGSPDSSSPNPLPQGAPPHSPGPPLPPSAAPSLGGSGAPPPP
PMPPPPLSSPFPVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKPP
VLGVRGLHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCR
DNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPEEMPVD
RILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSS
LPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRSLS
RVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQK
YPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgggctgctcgcccgcccttcctcccccagcggcatgccgcagggcagtgtggg
ccggtgggggtgcgaaaagaaatgcattgtggggtcgcgtcccggtggcggcggcgacgg
ccctggctggatcccgcagcaacggcggcggcggcggcagccggagaacaacaaaccccg
gagccggagccaggggaggctggacgggacgggatgggagacagcgggcgggattccgga
agcccagacagttcctccccaaatccccttccccagggtgctcctccccattctcctggg
ccacccctacccccttcagcagccccatcccttggaggctctggggcgccacccccaccc
ccaatgccaccacccccactgagctcccccttcccagttatcagctcttccatggggtcc
cctggtctgccccctccagctcccccaggattctccgggcctgtcagcagtccccagatt
aactcaacagtgtcgctccctgggggtgggtctggcccccctgaagatgtgaagccacca
gtcttaggggtccggggcctgcactgtccaccccctccaggtggccctggggctggcaaa
cggctatgtgcaatctgcggggaccgaagctcaggcaaacactatggagtttacagttgt
gagggctgcaaaggctttttcaagcgcaccattcgtaaggacctgacctactcatgccgg
gacaacaaagactgcacggtggataagcgtcagcggaaccgctgtcagtactgccgctat
cagaagtgcctggctactggtatgaagagggaagcggtacaggaggagcgtcagcggggg
aaagacaaggatggggatggggagggggccgggggagcccccgaggagatgcctgtggac
aggatcctggaggcagagcttgctgtggagcagaagagtgaccagggcgttgagggtcct
gggggaaccgggggtagcggcagcagcccaaatgaccctgtgactaacatctgtcaggca
gctgacaaacagctattcacacttgttgagtgggcgaagaggatcccacacttttcttcc
ttgcctctggatgaccaggtcatattgctacgggcaggctggaatgagctcctcattgcc
tccttctcccaccgatccattgatgtacgagatggcatcctccttgccacaggtcttcac
gtgcaccgcaactcagctcattctgcaggcgtgggagccatctttgatcggtccctctcc
agggtgctgacagagctagtgtccaaaatgcgtgacatgaggatggacaagacagagctt
ggctgcctgagggcaatcattctgttcaatccagatgccaagggtctttccaatcccagt
gaggtagaggtccttcgggagaaagtgtatgcatcactggaaacctattgcaaacagaag
taccctgagcagcagggacggtttgccaagctgctgctacgtcttcctgccctcaggtcc
attggccttaaatgtctagagcatctgtttttcttcaagctcattggtgacacccccatt
gacaccttcctcatggagatgctcgaggcaccccaccagctggcctga
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