Pteropus alecto (black flying fox): 102889234
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Entry
102889234 CDS
T02993
Symbol
TNRC6C
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
pale
Pteropus alecto (black flying fox)
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pale03019
]
102889234 (TNRC6C)
03036 Chromosome and associated proteins [BR:
pale03036
]
102889234 (TNRC6C)
Messenger RNA biogenesis [BR:
pale03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102889234 (TNRC6C)
Chromosome and associated proteins [BR:
pale03036
]
Eukaryotic type
Gene silencing
piRNA pathway
102889234 (TNRC6C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
RRM_1
RRM_occluded
THOC7
Motif
Other DBs
NCBI-GeneID:
102889234
NCBI-ProteinID:
XP_024902783
LinkDB
All DBs
Position
Unknown
AA seq
1648 aa
AA seq
DB search
MATGSAPGSFTGHAKKTNGNNGASGALVQSPSHRSALGAGAADGSGSAARVWGVATGSSA
GLAHCSLSGGDGKMDGMMGDGRSQNCWGASSSSAGINLNLNPNANPAAWPVLGHEGPVAT
GNPSSICSPVSAIGQNVGNQNGNPAGALGAWGSLLPQESTEPQTSTSQNVSFSVQPQNLN
TDGPNNTNPVNSSNPINAMQTNGLPNWSMAVGMGAIIPPHLQGLPGANGSSVSQVSGGGG
EGISSSVWGLSPGNPATGNSSSGFNQGNGDTVNSALSAKQNGSSSAAQKEGAGANAWDSG
PPAGPGVLAWGRGGGSNGVGNVHSGAWGHPGRSTSNGVNGDWGKPPNQHSNSDVSGKGST
GWDGPGGSSQSPAVQPGGEHVNSWAKAAPSGTAASEGSSDGSSSHNEGSAGRDGADGRRR
DRGVPDQGHVQLPRNDLDPRVLSNTGWGQTPVKQNTAWEFEESPRSERKNDNGTEAWGCA
AAQPSNSGGKNDGSIMNSTNTSSVSGWVSSPPAAGPANTGWGDSSNKAPNGPGVWGDSIS
STAVTNAAAAKSGHAWSGTVSQEDKSPTWGEPQKPKSQNWGDGQKSNPAWSAGGGDWADS
SSVLGHLGDGKKNGSGWDADGNRSGSGWNEATRSGTSGWGNGTNAKVNPGTNWGESLKPG
PQQNWASKPQDNTVSNWGGAASVKQTGTGWIGGPVPVKQKDSSEATGWEEPSPPSIRRKM
EIDDGTSAWGDPSTYNNRTVNMWDRNNPGIQSSATASSTATATTSSSTNVGETPPPHPAS
AQLSRSPLLGPVSSGWGEMPNVHSKAENSWGEPSSPSTLVDNGTAAWGKPPSSGSGWDQP
AEPTVPFGRAGAPTSAPALCKPASKSMQEGWGSGGDDMSLGPSQWEDEEGGMWNNAASQE
STSSCSSWGNAPKKGLQKREPAEEALKSNNMNLDQAMSALLEKKVDMDKRGLGVTDYNGM
VTKALGCRPPTSKESSVDRPTFLDKDGGLVEEPTTSPFLPSPSLKPPLSNSALPSQALGG
MASGLGMQNLNSSRQIPSGNLGVFGSSGAAQARTMPQPPVQPLNSSQPSLRAQVPQFLSP
QVQAQLLQFAAKNIGLNPALLTSPINPQHMTMLNQLYQLQLAYQRLQIQQQMLQAQRNVS
GPMRQQEQQVARTITNLQQQIQQHQRQLAQALLAKPPPPPHLSLHPSAGKSAMESFPPHP
QAPGLPDLQTKEQPSSPSTFAPYPLAGLNPSMNVSSVDMTGGLSVKDASQSQSRLPQWTH
PNPMDNLPGAASPLDQNPSKHGAIPGGLSIGPPAKSSIDDSYGRYDLIQNSESPASPPVA
VPHSWSRAKSDSDKISNGSSINWPPEFHPGVPWKGLQNIDPENDPDVTPGSVPTGPTINT
TIQDVNRYLLKSGGKLSDMKSTWSSGPASHTQASLSHELWKVPRNTTAPTRPPPGLTNPK
PSSTWGASPLGWTSSYSSGSAWSTDTSGRTSSWLVLRNLTPQIDGSTLRTLCLQHGPLVT
FHLNLTQGNAVVRYSSKDEAAKAQKSLHMCVLGNTTILAEFAGEEEVNRFLAQGQALPPT
SSWQSSSGAGQTRLGASGSSHGLARSDTGHWNAPCLAGKGSSDLLWGGVPQYSSSLWGPP
SSDDGRVIGSPTPLNTLLPGDLLSGESI
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atggctacaggcagcgccccgggcagcttcactgggcacgccaagaagacgaacggcaat
aatggcgccagcggcgcactcgtccagagcccctcccatcggagtgccctcggagcaggg
gcagcagacgggagcgggagcgcagccagagtgtggggcgtagccacgggctccagcgcc
ggcctcgctcactgctcgctcagcggtggggatgggaagatggacggcatgatgggagac
gggagaagtcagaactgctggggcgcttccagctccagtgccggcattaatcttaacctt
aaccccaacgccaacccagctgcctggcctgtgcttggacatgaaggacccgtggcgaca
ggcaacccttccagtatttgcagtccggtcagtgccatagggcaaaacgtgggcaaccag
aacgggaacccagcaggcgccctgggcgcctggggaagcctgctgccgcaggagagcaca
gagccacaaacgtccacttctcagaatgtgtctttcagcgtacaacctcagaaccttaac
actgatggaccaaataacactaaccccgtgaactcttcaaaccctatcaatgcaatgcag
acaaacggactgccaaactggagcatggctgtcggcatgggggccatcatcccgccccac
ctgcaaggccttcctggtgctaacggatcgtcggtttctcaagtcagcgggggcggtggc
gaaggaatcagcagttctgtgtggggactgtccccaggtaaccctgccacaggaaatagc
agttctgggttcaatcaggggaatggagacactgtgaactcagcattaagtgctaaacag
aatggatccagcagtgctgcgcagaaggaaggagccggagcgaacgcctgggactccggg
cctcccgccggccccggggtcctcgcttgggggcggggcggtggcagcaacggcgttggt
aatgtccattcgggagcgtggggccaccccggccgaagcacctcgaacggggtgaacggg
gactggggaaagcccccgaaccagcattccaatagcgacgtcagtggcaaagggtcaaca
gggtgggacggtcctggtgggagcagccagagccctgccgtgcagcccggcggcgaacac
gtgaactcctgggccaaagctgcaccttccggaaccgcggcgagcgaggggagcagcgac
gggtccagcagtcacaacgaaggcagcgcggggagggacggcgccgatggccgcaggcgc
gaccgaggcgtcccagaccaagggcacgtccagttgccaaggaacgacctcgacccaagg
gttctatctaataccggttggggacagactccagtaaagcaaaacactgcctgggaattt
gaggaatccccgaggtcggagagaaagaacgacaatgggaccgaggcctggggttgcgca
gctgctcagccttcaaactcaggggggaagaacgatgggtccatcatgaacagtacaaat
acctcttcagtatcggggtgggtcagctccccgcctgctgctgggccagcaaacacaggt
tggggagacagcagcaacaaagcgccaaatggcccaggggtttggggggactcgataagc
tctactgctgttactaatgctgctgctgccaagagcggccacgcttggagtgggaccgta
agtcaggaggacaagtcgcccacctggggtgagcctcaaaagcccaaatctcaaaactgg
ggcgatggacagaaatcaaatccagcctggagtgccggagggggcgattgggcagattca
tcgtctgtcctcggacacttgggcgacgggaaaaaaaatggctctggatgggatgccgac
ggtaatcgatcggggtctggttggaatgaggctacaaggtctgggaccagtggctggggc
aatggcacaaacgcaaaggtgaatccagggacaaactggggcgagtctttgaaacctggc
ccccagcagaactgggcgagcaaaccccaagacaacaccgtgagtaactggggaggagcc
gcttccgttaaacagacaggaacggggtggatcggggggccggtccccgtcaagcagaag
gacagcagcgaggccacgggctgggaagagccttctccaccatccatccgacgcaaaatg
gaaatcgatgatggtacctcagcttggggcgacccgagcacctacaacaacagaactgta
aacatgtgggacaggaacaacccgggcatccagagcagcgccacggccagctccaccgcc
accgccaccacgagcagcagcacaaacgtgggcgagacgccgccaccgcacccggccagc
gcccagctgagtcggtcgccgctgctcggtccagtttcttcaggctggggagaaatgcct
aatgttcattcaaaggccgaaaattcttggggagaaccatcctccccttctaccctggtg
gataacggcacagcagcgtggggcaagccgcccagcagcggcagcgggtgggaccagccc
gccgaacccaccgtgccgtttgggagagccggcgcgcccacttccgccccagccctgtgc
aaaccagcttcaaaatctatgcaagaaggctggggcagcggtggggacgacatgagcctc
ggccccagtcagtgggaagacgaagaagggggcatgtggaacaacgctgcttcccaagaa
agcacctcctcctgcagctcctgggggaacgcccccaagaagggactccaaaagagagag
ccagctgaagaggccttgaagagtaataatatgaatcttgatcaggccatgagcgctctg
ctggaaaagaaggtggacatggacaagcgtggactgggggtgaccgactacaatggaatg
gtcaccaaagcccttggctgccgcccaccgacctccaaagagtcttccgtggaccgcccc
acctttctcgacaaggacggcggcctcgtggaagagcccacgacttcaccatttttgcct
tcaccaagcctgaagccccccctttcaaacagcgcactccctagccaggccctaggcggg
atggcctcagggctgggcatgcaaaacttgaattcttctagacagataccgagtggcaat
ctgggtgtgtttggcagtagcggagcagcacaagccaggaccatgccgcagccgcccgtg
cagcctctgaactcctcccagcccagtctccgtgctcaagtgcctcagtttctatcccct
caggttcaagcacagcttttgcagttcgcagcaaaaaacattggtctcaaccctgcacta
ttaacctcgccgattaaccctcagcatatgacgatgttgaaccagctctatcagctgcag
ctggcgtaccaacgtttacaaatccagcagcagatgttacaggcccagcgtaatgtttcc
ggacccatgagacaacaggagcagcaagttgcgcgcacaatcactaacctgcagcagcag
attcagcagcaccagcgccagctggcccaggccctgctcgcgaagccgccgcccccgccg
cacctgtctctgcacccctctgcaggcaaatcggccatggagagcttccccccgcacccc
caggcccccggcctgcccgacctgcagaccaaagagcagccgtcttcacccagcaccttc
gctccttaccctctcgctggactgaatccaagcatgaatgtcagcagcgtggacatgact
ggcggtttgtcggtgaaggacgcgtctcagtcccagtcacgcctcccgcagtggacacac
cccaacccgatggataacctgcccggtgctgcttctcctctcgaccagaaccccagcaag
catggtgctatccctggaggtctgagcatcgggcctccagccaagtcctccatcgacgac
tcctatggccggtacgatttaatccagaacagtgagtcaccagccagccctccggtagct
gttccccatagctggtcacgtgccaaatctgacagtgataaaatctcaaatggctccagc
atcaactggcccccagaattccatcctggagtcccctggaaaggacttcagaatatagat
cctgagaacgaccccgatgtcactcctggaagtgtccccaccgggcccaccatcaacacc
accatccaggacgtgaaccgctacctcctcaagagcggaggtaaactgtcagacatgaaa
tcgacgtggtcctcgggccccgcctcccacacgcaagcctctctgtctcatgagctgtgg
aaggtgcccagaaacactactgcacccacgaggccacctccagggctaaccaatcccaag
ccttcctccacctggggggccagccccctcggctggaccagctcttactcctccggttct
gcttggagcaccgacacctcaggaaggacaagcagctggctcgttctccgcaacctcacg
ccccagatcgacggttccacgctgcggacgctgtgcctgcagcacgggcctctcgttacc
ttccacctgaacctgacccaaggcaacgccgtggtccgctacagctccaaggacgaagcc
gccaaggcccagaagtccctgcacatgtgcgttttgggaaacaccaccatcttggccgag
ttcgctggcgaagaagaagtgaaccgtttcctagcgcaaggccaagcgctgccgcccacc
tccagctggcagtccagctccggggccggccagacgaggctgggcgcctcgggcagctcc
cacggcctggcgcggagcgacaccggccactggaacgccccgtgcctggcaggcaaaggc
agcagcgacctgctgtggggcggggtcccccagtactcaagcagcctgtggggcccgccc
agcagcgacgacggcagggtgatcgggagccccaccccgctgaacactctgcttcccggc
gaccttctcagtggggagtccatctag
DBGET
integrated database retrieval system
