Pteropus alecto (black flying fox): 102889848
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Entry
102889848 CDS
T02993
Symbol
SMARCD3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
pale
Pteropus alecto (black flying fox)
Pathway
pale03082
ATP-dependent chromatin remodeling
pale04714
Thermogenesis
pale05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102889848 (SMARCD3)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
102889848 (SMARCD3)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
102889848 (SMARCD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pale03021
]
102889848 (SMARCD3)
03036 Chromosome and associated proteins [BR:
pale03036
]
102889848 (SMARCD3)
Transcription machinery [BR:
pale03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102889848 (SMARCD3)
Chromosome and associated proteins [BR:
pale03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102889848 (SMARCD3)
PBAF complex
102889848 (SMARCD3)
GBAF(ncBAF) complex
102889848 (SMARCD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
102889848
NCBI-ProteinID:
XP_015451673
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MTPGLQHPPAVVQRPGMPSGARMPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXARKRAAP
PPGQSQAQSQGQPLPTAPARSRSAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQ
TIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAKPDAEDSDGSIASWELRVEGKLLDDP
SKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDLSVRCTLLL
MLDYQPPQFKLDPRLARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQI
FDCPRLKFSEIPQRLTALLLPPDPIVINHVISVDPSDQKKTACYDIDVEVEEPLKGQMSS
FLLSTANQQEISALDSKIHETIESINQLKIQRDFMLSFSRDPKGYIQDLLRSQSRDLKVM
TDVAGNPEEERRAEFYHQPWSQEAVSRYFYCKIQQRRQELEQSLVVRNT
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgactccaggccttcagcacccacctgccgtggtccagcgccccgggatgccgtctgga
gcccggatgccccacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncgcccgcaagcgagcagcgccc
ccgcccggccagagccaggcccagagccagggccagccgctgcccaccgcccccgcgcgg
agccgcagtgccaagaggaggaagatggctgacaaaatcctccctcaaaggatccgggag
ctggtccccgagtcccaggcttacatggacctcctggcatttgagaggaaactggatcaa
accatcatgcggaagcgagtggacatccaggaggctctgaagaggccaatgaagcaaaag
cggaagctgcgtctttatatctccaatacctttaaccctgcaaagccggatgccgaggat
tctgatggcagcatcgcctcctgggagctgcgggtggaggggaagctcctggatgacccc
agcaaacagaagcgaaagttctcttccttcttcaagagtttggtcattgagctggacaaa
gacctttatggccctgacaaccacctagtcgagtggcaccgaacgcccaccacccaggag
acagacgggttccaggtgaagaggccaggggacctgagcgtgcgctgcacgctgctcctc
atgctggactaccagcctccccagttcaaactggatccccgcctggcccgcctgctgggg
ctgcacacacagagccgctcggccatcgtgcaggccctgtggcagtatgtgaagacaaac
aggctgcaggactcacacgacaaggaatacatcaacggggacaaatatttccagcagatt
tttgattgtccccggctgaagttttctgagattccccagcgcctcacagctctgctgttg
ccccctgacccaattgtcatcaaccacgtcatcagtgtggacccgtcggaccagaagaag
acggcgtgctatgacattgacgtggaggtagaggagccgctgaaggggcagatgagcagc
ttcctcctgtccacagccaaccagcaggagatcagcgctctggacagtaagatccatgag
acgattgagtccataaaccagctcaagatccagagggacttcatgctaagcttctccagg
gaccccaaaggctacatccaagacctgctccgctcccagagccgggacctcaaggtgatg
acggatgtggcgggcaaccccgaggaggagcgccgggctgagttctaccaccagccctgg
tcccaggaagccgtcagccgctacttctactgcaagatccagcagcgcaggcaggagctg
gagcagtcactggtcgtgcgcaatacctag
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